RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 FAM223BA6NKX1 122 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 PRSS46E5RG02 174 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 E7EUB6 86 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 TSPAN15O95858 294 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 HBE1P02100 147 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 FGF7P21781 194 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 ATP6V0CP27449 155 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 CAMLGP49069 296 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 PPT1P50897 306 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 IFITM2Q01629 132 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 AKR1C1Q04828 323 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 GAMTQ14353 236 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 TMEM95Q3KNT9 176 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 SPINK9Q5DT21 86 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 SLC16A13Q7RTY0 426 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 FAM223AQ8IWN6 122 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 LFNGQ8NES3 379 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 OR1L4Q8NGR5 311 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 DUX5Q96PT3 197 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 TRGV9Q99603 122 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 SMDT1Q9H4I9 107 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 WFDC1Q9HC57 220 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 PARP11Q9NR21 331 aa5.52□□□□□ -1.53
SHQ1-207ENST00000475558 LSM4Q9Y4Z0 139 aaKnown RBP5.52□□□□□ -1.53
SHQ1-207ENST00000475558 DSCAML1Q8TD84 2053 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 IGLV11-55A0A075B6I3 123 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 TRAV1-1A0A0B4J248 108 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 SMCO3A2RU48 225 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 HMGB3O15347 200 aaKnown RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 CLN5O75503 358 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 ELANEP08246 267 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 EGR2P11161 476 aaPredicted RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 M6PRP20645 277 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 YPEL3P61236 119 aaPredicted RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 ATP5G2Q06055 141 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 PMS2P11Q13670 270 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 LY6EQ16553 131 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 C9orf152Q5JTZ5 239 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 SPSB3Q6PJ21 355 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 BCL6BQ8N143 479 aaPredicted RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 Q8N2B8 174 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 THAP8Q8NA92 274 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 HSD17B11Q8NBQ5 300 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 STXBP6Q8NFX7 210 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 SUN5Q8TC36 379 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 Q8WTZ3 238 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 GATAD1Q8WUU5 269 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 EEF1AKMT3Q96AZ1 226 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 MISP3Q96FF7 219 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 PFDN5Q99471 154 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 NPCDR1Q9BY65 106 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 ACTR3CQ9C0K3 210 aaPredicted RBP5.51□□□□□ -1.53
SHQ1-207ENST00000475558 ZNF355PQ9NSJ1 428 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 SLC39A9Q9NUM3 307 aa5.51□□□□□ -1.53
SHQ1-207ENST00000475558 TRBV9A0A0B4J1U6 114 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 A0A1B0GW64 132 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 A0A1W2PPV4 95 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TCRBV4S1A1TA0A5B7 111 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 ZFP92A6NM28 416 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 ZNF705EA8MWA4 302 aaPredicted RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 I3L2K1 104 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 M0QZ24 198 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 AGPAT2O15120 278 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 ATP6V0E1O15342 81 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 NUPL2O15504 423 aaKnown RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 NDUFS6O75380 124 aaKnown RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 IGHV4-59P01825 116 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 AMY1AP04745 511 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 MYOD1P15172 320 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 AREGP15514 252 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 PPIFP30405 207 aaKnown RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 RAB9AP51151 201 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TAS2R45P59539 299 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 PLP1P60201 277 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 SSBP2P81877 361 aaPredicted RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TMEM41BQ5BJD5 291 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 C10orf55Q5SWW7 151 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TEX38Q6PEX7 206 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 ALKAL2Q6UX46 152 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TMEM219Q86XT9 240 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 BPIFCQ8NFQ6 507 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 OR5T1Q8NG75 326 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 OR2T6Q8NHC8 308 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TMEM170AQ8WVE7 144 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TMED6Q8WW62 240 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 MBD3L1Q8WWY6 194 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 RBMXL1Q96E39 390 aaKnown RBP5.5□□□□□ -1.53
SHQ1-207ENST00000475558 DNAJC4Q9NNZ3 241 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 TNFRSF19Q9NS68 423 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 C21orf62Q9NYP8 219 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 SLC45A2Q9UMX9 530 aa5.5□□□□□ -1.53
SHQ1-207ENST00000475558 UBE2L5PA0A1B0GUS4 154 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms