RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 EGR1P18146 543 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 PRDX2P32119 198 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OTX2P32243 289 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 MPV17P39210 176 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 AESQ08117 197 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 TDRG1Q3Y452 100 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OCIAD2Q56VL3 154 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 TMEM164Q5U3C3 297 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 RBPMS2Q6ZRY4 209 aaKnown RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OR9G4Q8NGQ1 327 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 OR10X1Q8NGY0 326 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 SLC25A40Q8TBP6 338 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 SSMEM1Q8WWF3 244 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 PERPQ96FX8 193 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 FER1L6-AS2Q96M78 137 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 GPR82Q96P67 336 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 TTTY12Q9BZ98 90 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 RPP21Q9H633 154 aaKnown RBP6.58□□□□□ -1.36
CCDC93-208ENST00000474546 LINC00574Q9H8X3 128 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 KLF12Q9Y4X4 402 aa6.58□□□□□ -1.36
CCDC93-208ENST00000474546 A0A1B0GXF2 115 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 C2orf70A6NJV1 201 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 SRRM5B3KS81 715 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 SYS1-DBNDD2H3BUS1 97 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 J3QR89 54 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 K7EQM0 130 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 UPK2O00526 184 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 TIMM8AO60220 97 aaPredicted RBP6.57□□□□□ -1.36
CCDC93-208ENST00000474546 CIDEAO60543 219 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 IGHV3-9P01782 118 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 CCL2P13500 99 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 S100A7P31151 101 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 FOXL2P58012 376 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 CD69Q07108 199 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 Q56UQ5 140 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 GCSAMLQ5JQS6 135 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 C10orf113Q5VZT2 155 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 WDR82Q6UXN9 313 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 Q6ZT83 130 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 SSX8Q7RTT4 187 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 WDR86Q86TI4 376 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 PDPNQ86YL7 162 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 DOLPP1Q86YN1 238 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 C5orf17Q8NAS9 161 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 TMEM178AQ8NBL3 297 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 OR4F17Q8NGA8 305 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 OR10AG1Q8NH19 301 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 KLF14Q8TD94 323 aaPredicted RBP6.57□□□□□ -1.36
CCDC93-208ENST00000474546 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 IFI27L2Q9H2X8 130 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
CCDC93-208ENST00000474546 ZNF430Q9H8G1 570 aaPredicted RBP6.57□□□□□ -1.36
CCDC93-208ENST00000474546 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
CCDC93-208ENST00000474546 A0A0G2JMM0 328 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 A0A1B0GUS0 222 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 A0A1W2PPB8 328 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 KIR3DP1A8MWS1 328 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 GGTLC3B5MD39 225 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 CHEK1O14757 476 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 IGKV3-15P01624 115 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 IGLV2-8P01709 118 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 P01737 135 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A10P0DMU9 189 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 IGLL1P15814 213 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 IGFBP2P18065 325 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 APOBEC3AP31941 199 aaPredicted RBP6.56□□□□□ -1.36
CCDC93-208ENST00000474546 TFPI2P48307 235 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 PAX2Q02962 417 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 SRYQ05066 204 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 RIGQ13278 110 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 TNXAQ16473 311 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 BPIFA4PQ86YQ2 179 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 NUP35Q8NFH5 326 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 OR4X2Q8NGF9 303 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 OR13A1Q8NGR1 328 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 C5orf30Q96GV9 206 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 NPFFR1Q9GZQ6 430 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
CCDC93-208ENST00000474546 CALYQ9NYX4 217 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 PLA2G3Q9NZ20 509 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 WASHC3Q9Y3C0 194 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 LOXL2Q9Y4K0 774 aa6.56□□□□□ -1.36
CCDC93-208ENST00000474546 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
CCDC93-208ENST00000474546 ACANP16112 2415 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 NCKAP5O14513 1909 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 TRGV5A0A0B4J1U4 118 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 KBTBD11-OT1A0A1B0GTJ5 212 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 SERTM2A0A1B0GWG4 89 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 TCRBV4S1A1TA0A5B7 111 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 HIGD1CA8MV81 97 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 SHISA9B4DS77 424 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms