RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
SAMM50-203ENST00000474323 ZNF841Q6ZN19 808 aa11.86□□□□□ -0.51
SAMM50-203ENST00000474323 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
SAMM50-203ENST00000474323 FDCSPQ8NFU4 85 aa11.86□□□□□ -0.51
SAMM50-203ENST00000474323 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
SAMM50-203ENST00000474323 C15orf61A6NNL5 157 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 SPINT2O43291 252 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 COX8AP10176 69 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 GABRA6Q16445 453 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 Q5PR19 223 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 SSX8Q7RTT4 187 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 RFESDQ8TAC1 157 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 HSPE1P61604 102 aaKnown RBP11.85□□□□□ -0.51
SAMM50-203ENST00000474323 RBPJQ06330 500 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 OR13A1Q8NGR1 328 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 H1FXQ92522 213 aaKnown RBP11.85□□□□□ -0.51
SAMM50-203ENST00000474323 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 S1PR3Q99500 378 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
SAMM50-203ENST00000474323 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
SAMM50-203ENST00000474323 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
SAMM50-203ENST00000474323 C9orf118A6NHY6 69 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 GRPP07492 148 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 HBBP68871 147 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 LINC00479Q96M42 142 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 OR51B2Q9Y5P1 312 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 ANKRD11Q6UB99 2663 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-203ENST00000474323 H3BRM9 83 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 HTR1DP28221 377 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 C3AR1Q16581 482 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 TMEM97Q5BJF2 176 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 Q6ZR03 302 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 C2orf91Q6ZV80 131 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-203ENST00000474323 MRPL32Q9BYC8 188 aaKnown RBP11.84□□□□□ -0.51
SAMM50-203ENST00000474323 DEFB127Q9H1M4 99 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
SAMM50-203ENST00000474323 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-203ENST00000474323 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
SAMM50-203ENST00000474323 APC2O95996 2303 aa11.83□□□□□ -0.51
SAMM50-203ENST00000474323 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 C15orf65H3BRN8 121 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
SAMM50-203ENST00000474323 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 SOX21Q9Y651 276 aaPredicted RBP11.83□□□□□ -0.52
SAMM50-203ENST00000474323 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 PPIAL4DF5H284 164 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 ASPHD1Q5U4P2 390 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 TMEM186Q96B77 213 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 ACACAQ13085 2346 aa11.83□□□□□ -0.52
SAMM50-203ENST00000474323 A6NDN8 102 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 K7EP34 96 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 LINC01545Q5VT33 79 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 TMEM178AQ8NBL3 297 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 DMXL2Q8TDJ6 3036 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 WNT9BO14905 357 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 LGALS7P47929 136 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
SAMM50-203ENST00000474323 TPRX1Q8N7U7 411 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
SAMM50-203ENST00000474323 SVILO95425 2214 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 PEX7O00628 323 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 APOA2P02652 100 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 CEACAM3P40198 252 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
SAMM50-203ENST00000474323 ACP7Q6ZNF0 438 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 DOCK7Q96N67 2140 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 TBC1D28Q2M2D7 210 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
SAMM50-203ENST00000474323 SPTBN4Q9H254 2564 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 LTC4SQ16873 150 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 SAMD13Q5VXD3 122 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 MDP1Q86V88 176 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 OR2K2Q8NGT1 345 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 LRRC29Q8WV35 223 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 DDB2Q92466 427 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 DPF1Q92782 380 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 SLC25A2Q9BXI2 301 aa11.8□□□□□ -0.52
SAMM50-203ENST00000474323 IQCF6A8MYZ5 107 aa11.79□□□□□ -0.52
SAMM50-203ENST00000474323 SCGB1A1P11684 91 aa11.79□□□□□ -0.52
SAMM50-203ENST00000474323 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
SAMM50-203ENST00000474323 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
SAMM50-203ENST00000474323 RPL39P5Q59GN2 51 aa11.79□□□□□ -0.52
SAMM50-203ENST00000474323 ZNF329Q86UD4 541 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms