RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR4E1P0C645 316 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 TEX261Q6UWH6 196 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 KRT222Q8N1A0 295 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 RASL12Q9NYN1 266 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 UBAP1Q9NZ09 502 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 EPDR1Q9UM22 224 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 CYSLTR1Q9Y271 337 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 SLC35A3Q9Y2D2 325 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 U3KQ87 197 aa0.73□□□□□ -2.29
CLK1-209ENST00000472679 V9GYY5 206 aaPredicted RBP0.73□□□□□ -2.29
CLK1-209ENST00000472679 SBF1O95248 1867 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 LYPLA2O95372 231 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 RBP1P09455 135 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 BRMS1LQ5PSV4 323 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 SOSTDC1Q6X4U4 206 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 SBSPONQ8IVN8 264 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 CLECL1Q8IZS7 167 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 C12orf45Q8N5I9 185 aaPredicted RBP0.72□□□□□ -2.29
CLK1-209ENST00000472679 WFDC5Q8TCV5 224 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 DOCK3Q8IZD9 2030 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 E9PCH4 1651 aa0.72□□□□□ -2.29
CLK1-209ENST00000472679 MPV17LQ2QL34 196 aa0.71□□□□□ -2.3
CLK1-209ENST00000472679 ADAT3Q96EY9 351 aaPredicted RBP0.71□□□□□ -2.3
CLK1-209ENST00000472679 CCDC90BQ9GZT6 254 aa0.71□□□□□ -2.3
CLK1-209ENST00000472679 NHP2Q9NX24 153 aaKnown RBP0.71□□□□□ -2.3
CLK1-209ENST00000472679 ADCY9O60503 1353 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 MED1Q15648 1581 aaPredicted RBP0.7□□□□□ -2.3
CLK1-209ENST00000472679 SNRNP200O75643 2136 aaKnown RBP0.7□□□□□ -2.3
CLK1-209ENST00000472679 A0A087WUJ7 227 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 KPNA3O00505 521 aaPredicted RBP0.7□□□□□ -2.3
CLK1-209ENST00000472679 YPEL3P61236 119 aaPredicted RBP0.7□□□□□ -2.3
CLK1-209ENST00000472679 C12orf74Q32Q52 190 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 SPRNQ5BIV9 151 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 BORCS5Q969J3 196 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 CCDC42Q96M95 316 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 C14orf105Q9NVL8 296 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 DENND4CQ5VZ89 1909 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 PKD1L2Q7Z442 2459 aa0.7□□□□□ -2.3
CLK1-209ENST00000472679 PEAK1Q9H792 1746 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
CLK1-209ENST00000472679 C1orf196B1AJZ1 125 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 CLDN25C9JDP6 229 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 ZNF682O95780 498 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 CASP1P29466 404 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 TSNQ15631 228 aaKnown RBP0.69□□□□□ -2.3
CLK1-209ENST00000472679 ESRGQ1W209 222 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 TRAPPC5Q8IUR0 188 aa0.69□□□□□ -2.3
CLK1-209ENST00000472679 UTP11Q9Y3A2 253 aaKnown RBP0.69□□□□□ -2.3
CLK1-209ENST00000472679 TAF1LQ8IZX4 1826 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 CACNA1AO00555 2505 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 A0A087X0T9 212 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 hADV38S2A0JD32 116 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 NIPSNAP2O75323 286 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 RPS17P08708 135 aaKnown RBP0.68□□□□□ -2.3
CLK1-209ENST00000472679 PTRHD1Q6GMV3 140 aaKnown RBP0.68□□□□□ -2.3
CLK1-209ENST00000472679 LINC00301Q8NCQ3 95 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 CT55Q8WUE5 264 aa0.68□□□□□ -2.3
CLK1-209ENST00000472679 CMSS1Q9BQ75 279 aaKnown RBP0.68□□□□□ -2.3
CLK1-209ENST00000472679 RNASE7Q9H1E1 156 aaKnown RBP0.68□□□□□ -2.3
CLK1-209ENST00000472679 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
CLK1-209ENST00000472679 hCG_1818297A0A087WSY0 165 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 C7orf71A4D174 169 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 A8MT66 165 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 SMIM17P0DL12 118 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 OMPP47874 163 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 DEFA3P59666 94 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 RANP62826 216 aaKnown RBP0.67□□□□□ -2.3
CLK1-209ENST00000472679 IAH1Q2TAA2 248 aaPredicted RBP0.67□□□□□ -2.3
CLK1-209ENST00000472679 GDPD1Q8N9F7 314 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 OR8D4Q8NGM9 314 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 HIST1H2BLQ99880 126 aa0.67□□□□□ -2.3
CLK1-209ENST00000472679 SMIM23A6NLE4 172 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 NCR3O14931 201 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 CCL25O15444 150 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 DNAL4O96015 105 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 LCA10Q71F78 164 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 BORCS7Q96B45 105 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 C6orf62Q9GZU0 229 aaPredicted RBP0.66□□□□□ -2.3
CLK1-209ENST00000472679 BCL2L10Q9HD36 194 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 UQCC1Q9NVA1 299 aa0.66□□□□□ -2.3
CLK1-209ENST00000472679 OR8J2Q8NGG1 315 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 C4orf3Q8WVX3 66 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 ARL5BQ96KC2 179 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 C2orf50Q96LR7 162 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 SCN10AQ9Y5Y9 1956 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
CLK1-209ENST00000472679 MYO3BQ8WXR4 1341 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 SMIM9A6NGZ8 99 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 SRIP30626 198 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 LSM6P62312 80 aaKnown RBP0.64□□□□□ -2.31
CLK1-209ENST00000472679 AESQ08117 197 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 Q8IYB0 196 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 OR6V1Q8N148 313 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 SLC25A40Q8TBP6 338 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 TEX47Q8TBZ9 253 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 PATE1Q8WXA2 126 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 TMEM70Q9BUB7 260 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.64□□□□□ -2.31
CLK1-209ENST00000472679 NOSIPQ9Y314 301 aaKnown RBP0.64□□□□□ -2.31
CLK1-209ENST00000472679 PRELID3BQ9Y3B1 194 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms