RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SDHCQ99643 169 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 Q9H3A6 140 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RHOGP84095 191 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 UBE2E2Q96LR5 201 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PSME4Q14997 1843 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 GNG5P63218 68 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 CCDC168Q8NDH2 2452 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 COQ2Q96H96 371 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 POC1AQ8NBT0 407 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 UBE2BP63146 152 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SVIPQ8NHG7 77 aa11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 HLA-DQB1P01920 261 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MGST2Q99735 147 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 WFDC6Q9BQY6 131 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 NR2C2APQ86WQ0 139 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 IGHV2OR16-5A0A0B4J2B6 119 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 LINC00587B1AMM8 73 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 IGHV1-2P23083 117 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 C17orf98A8MV24 154 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ZNF345Q14585 488 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RIPPLY2Q5TAB7 128 aa11.11□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SS18Q15532 418 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TAL2Q16559 108 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 C17orf100A8MU93 164 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 STPG2Q8N412 459 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ORMDL3Q8N138 153 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MAPK1IP1LQ8NDC0 245 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 Q96M66 194 aa11.1□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 UCP1P25874 307 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PSG7Q13046 419 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MRPL52Q86TS9 123 aaKnown RBP11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 C9orf106Q8NAJ2 232 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 GATA4P43694 442 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ZXDCQ2QGD7 858 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 C19orf24Q9BVV8 132 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 NBR2O15453 112 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 EGR4Q05215 589 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 HIST1H2BAQ96A08 127 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 CITED1Q99966 193 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 DDTP30046 118 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 BRD3OSQ6XYD6 125 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PILRAQ9UKJ1 303 aa11.09□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 MMP23AO75900 390 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 C12orf77C9JDV5 145 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 LCNL1Q6ZST4 164 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 AQP3Q92482 292 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 C2orf68Q2NKX9 166 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 F5H768 121 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 NOTCH2Q04721 2471 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 GREB1LQ9C091 1923 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 PGPEP1LA6NFU8 196 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 THBDP07204 575 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 SMDT1Q9H4I9 107 aa11.08□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 TM4SF5O14894 197 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 C1orf122Q6ZSJ8 110 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 PRDM13Q9H4Q3 707 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 NPIPB13A6NJU9 1138 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 NDPQ00604 133 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 FUT5Q11128 374 aa11.07□□□□□ -0.64
NPHP3-ACAD11-201ENST00000471702 ERCC8Q13216 396 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms