RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 DENND4CQ5VZ89 1909 aa0.69□□□□□ -2.3
COPS3-206ENST00000471414 TNRC6BQ9UPQ9 1833 aaKnown RBP0.68□□□□□ -2.3
COPS3-206ENST00000471414 TRAV1-1A0A0B4J248 108 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 C2orf70A6NJV1 201 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 ASAH2BP0C7U1 165 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 BAALC-AS2P0C853 105 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 CASP1P29466 404 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 BRS3P32247 399 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 ERVS71-1P61550 626 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 MED1Q15648 1581 aaPredicted RBP0.68□□□□□ -2.3
COPS3-206ENST00000471414 AKIRIN2Q53H80 203 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 TEX36Q5VZQ5 186 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 LINC00311Q8N616 119 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 SLC25A40Q8TBP6 338 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 GPR146Q96CH1 333 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 RNF122Q9H9V4 155 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 EPDR1Q9UM22 224 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 EML6Q6ZMW3 1958 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 EXPH5Q8NEV8 1989 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 MYH7BA7E2Y1 1941 aa0.68□□□□□ -2.3
COPS3-206ENST00000471414 RP1P56715 2156 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 ARFGEF3Q5TH69 2177 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 TAF1LQ8IZX4 1826 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 A0A087X0T9 212 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 TMEM210A6NLX4 147 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 J3QRK9 145 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 OR1I1O60431 355 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 OR7C1O76099 320 aaPredicted RBP0.67□□□□□ -2.3
COPS3-206ENST00000471414 UBL3O95164 117 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 OR4E1P0C645 316 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 SMIM17P0DL12 118 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 SSR2P43308 183 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 RHOGP84095 191 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 PDE6HQ13956 83 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 Q6Q795 121 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 LCA10Q71F78 164 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 OR13D1Q8NGV5 346 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 BTF3L4Q96K17 158 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 SIGMAR1Q99720 223 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 KIFC1Q9BW19 673 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 NHP2Q9NX24 153 aaKnown RBP0.67□□□□□ -2.3
COPS3-206ENST00000471414 TVP23BQ9NYZ1 205 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 SLC35A3Q9Y2D2 325 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 ALPK2Q86TB3 2170 aa0.67□□□□□ -2.3
COPS3-206ENST00000471414 CEP192Q8TEP8 1941 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 DOCK3Q8IZD9 2030 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 A0A087WX48 190 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 IGKV2D-26A0A0A0MRZ7 120 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 C7orf71A4D174 169 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 C1orf196B1AJZ1 125 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 GEMIN2O14893 280 aaKnown RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 SULT1B1O43704 296 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 HYPMO75409 117 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 IFNA6P05013 189 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 MGST1P10620 155 aaKnown RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 RAB4BP61018 213 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 REEP5Q00765 189 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 TSNQ15631 228 aaKnown RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 LIN52Q52LA3 116 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 RNASE10Q5GAN6 216 aaKnown RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 OR8D4Q8NGM9 314 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 OR10J5Q8NHC4 309 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 WFDC5Q8TCV5 224 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 GNPDA2Q8TDQ7 276 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 ITFG2Q969R8 447 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 ADAT3Q96EY9 351 aaPredicted RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 HIST1H2BLQ99880 126 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 NMNAT1Q9HAN9 279 aaPredicted RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 HS3ST2Q9Y278 367 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 ARL2BPQ9Y2Y0 163 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 OBSL1O75147 1896 aa0.66□□□□□ -2.3
COPS3-206ENST00000471414 PCF11O94913 1555 aaKnown RBP0.66□□□□□ -2.3
COPS3-206ENST00000471414 ARHGEF28Q8N1W1 1705 aaKnown RBP0.65□□□□□ -2.31
COPS3-206ENST00000471414 TRAV3A0A0B4J244 114 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 TRAV12-1A0A0B4J245 112 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 IGKV1-9A0A0C4DH69 117 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 CYB5BO43169 146 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 LYZL6O75951 148 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 PROSCO94903 275 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 CST2P09228 141 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 ERP29P30040 261 aaKnown RBP0.65□□□□□ -2.31
COPS3-206ENST00000471414 ANP32AP39687 249 aaKnown RBP0.65□□□□□ -2.31
COPS3-206ENST00000471414 DEFA3P59666 94 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 BRMS1LQ5PSV4 323 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 LYRM7Q5U5X0 104 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 OR11H6Q8NGC7 330 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 FAM172AQ8WUF8 416 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 SFT2D1Q8WV19 159 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 CHMP6Q96FZ7 201 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 TMEM133Q9H2Q1 129 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 PARVBQ9HBI1 364 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 KLK9Q9UKQ9 250 aa0.65□□□□□ -2.31
COPS3-206ENST00000471414 FMN1Q68DA7 1419 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 RIMBP3CA6NJZ7 1639 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 RIMBP3BA6NNM3 1639 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 CAMSAP1Q5T5Y3 1602 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 RIMBP3Q9UFD9 1639 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 LOC110117498A0A087WWA1 95 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms