RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 KLK9Q2XQG4 91 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 ACSM6Q6P461 480 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 Q6YL49 198 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 CYP2G1PQ6ZSU1 146 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 MAPK1IP1LQ8NDC0 245 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 OR2T6Q8NHC8 308 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 SGMS2Q8NHU3 365 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 SFT2D1Q8WV19 159 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 NPIPB3Q92617 1050 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 RNF2Q99496 336 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 TRGV9Q99603 122 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 GGTLC1Q9BX51 225 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 EPG5Q9HCE0 2579 aa4.79□□□□□ -1.64
SMNDC1-204ENST00000471297 UBR5O95071 2799 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 TRAV30A0A087WSZ9 112 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 A0A087WWL8 130 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 TCRBV4S1A1TA0A5B7 111 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 SEC14L6B5MCN3 397 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 H3BUX3 64 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 I3L2K1 104 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 NDUFS6O75380 124 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 SCGB2A1O75556 95 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 MT-CO2P00403 227 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 SLPIP03973 132 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FABP1P07148 127 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 LINC00869P0C866 280 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 OR10J1P30954 320 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 TAGLN2P37802 199 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 CDC34P49427 236 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 PPT1P50897 306 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 CRIP2P52943 208 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 MFAP2P55001 183 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 RHOBP62745 196 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FOXI1Q12951 378 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 GUK1Q16774 197 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 AKIRIN2Q53H80 203 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 MIC13Q5XKP0 118 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM122CQ6P4D5 195 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 RBMS3Q6XE24 437 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 RPP25LQ8N5L8 163 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 WFDC11Q8NEX6 87 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 OR1L4Q8NGR5 311 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 OR4X1Q8NH49 305 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 OR5R1Q8NH85 324 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM210AQ96ND0 272 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 PRDM13Q9H4Q3 707 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 VSIRQ9H7M9 311 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 TREM1Q9NP99 234 aa4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 USP9XQ93008 2570 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-204ENST00000471297 ARID1AO14497 2285 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 KALRNO60229 2985 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 TET2Q6N021 2002 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ADGRG4Q8IZF6 3080 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ZFYVE26Q68DK2 2539 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 IGLV11-55A0A075B6I3 123 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 TMEM218A2RU14 115 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 MAP1LC3B2A6NCE7 125 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 RBFOX3A6NFN3 312 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ZFP92A6NM28 416 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 CLN5O75503 358 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 YIF1AO95070 293 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 IFNA1P01562 189 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 CD5P06127 495 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 APELAP0DMC3 54 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ZP3P21754 424 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 NPBWR1P48145 328 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 PSMB3P49720 205 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 RND2P52198 227 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 MFAP4P55083 255 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 NDPQ00604 133 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 DEFB112Q30KQ8 113 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 KHDC3LQ587J8 217 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ASPHD1Q5U4P2 390 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 TMEM219Q86XT9 240 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 BPIFCQ8NFQ6 507 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 VN1R17PQ8TDU5 208 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ACY3Q96HD9 319 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF48Q96MX3 618 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 PFDN5Q99471 154 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 TXN2Q99757 166 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 HSPB9Q9BQS6 159 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 FAM103A1Q9BTL3 118 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 MAP1LC3BQ9GZQ8 125 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 EIF5A2Q9GZV4 153 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 TNFRSF19Q9NS68 423 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 FAM208BQ5VWN6 2430 aa4.77□□□□□ -1.65
SMNDC1-204ENST00000471297 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 IGKV1OR2-108A0A075B7D4 117 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 TRBV9A0A0B4J1U6 114 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms