RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 DFFBO76075 338 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 RPL27AP46776 148 aaKnown RBP10.3□□□□□ -0.76
HMGN1-211ENST00000471260 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 CATR1Q13166 79 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 SELENOHQ8IZQ5 122 aaKnown RBP10.3□□□□□ -0.76
HMGN1-211ENST00000471260 VKORC1L1Q8N0U8 176 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 CD300LFQ8TDQ1 290 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 CCL28Q9NRJ3 127 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 BET1LQ9NYM9 111 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 CACFD1Q9UGQ2 172 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.29□□□□□ -0.76
HMGN1-211ENST00000471260 A0A1B0GU03 582 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 TEX22C9J3V5 150 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 NUPL2O15504 423 aaKnown RBP10.29□□□□□ -0.76
HMGN1-211ENST00000471260 RBMXL2O75526 392 aaKnown RBP10.29□□□□□ -0.76
HMGN1-211ENST00000471260 HPRT1P00492 218 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 IFNA4P05014 189 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 CRYGCP07315 174 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 NPBWR1P48145 328 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 RPL8P62917 257 aaKnown RBP10.29□□□□□ -0.76
HMGN1-211ENST00000471260 VAMP2P63027 116 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 SP6Q3SY56 376 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 RNF212Q495C1 297 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 OR2K2Q8NGT1 345 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 LSM10Q969L4 123 aaKnown RBP10.29□□□□□ -0.76
HMGN1-211ENST00000471260 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 BIN3Q9NQY0 253 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 KLK9Q9UKQ9 250 aa10.29□□□□□ -0.76
HMGN1-211ENST00000471260 HBE1P02100 147 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 PRH1P02810 166 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 CSN3P07498 182 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-211ENST00000471260 NQO2P16083 231 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 HOXA1P49639 335 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-211ENST00000471260 AKR1C2P52895 323 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 RAB2AP61019 212 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
HMGN1-211ENST00000471260 ID3Q02535 119 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 AKR1C1Q04828 323 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 POU2AF1Q16633 256 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 GUK1Q16774 197 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 C15orf32Q32M92 178 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 C10orf55Q5SWW7 151 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 LCN12Q6JVE5 192 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 Q8N1Y9 231 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 RAB40CQ96S21 281 aa10.28□□□□□ -0.76
HMGN1-211ENST00000471260 SRSF8Q9BRL6 282 aaKnown RBP10.28□□□□□ -0.76
HMGN1-211ENST00000471260 E7EUB6 86 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 BMPR1BO00238 502 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 WRBO00258 174 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 TNFSF12O43508 249 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 SCAF4O95104 1147 aaKnown RBP10.27□□□□□ -0.77
HMGN1-211ENST00000471260 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 HIST1H1BP16401 226 aaKnown RBP10.27□□□□□ -0.77
HMGN1-211ENST00000471260 F2RP25116 425 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 STX12Q86Y82 276 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 PARD6GQ9BYG4 376 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-211ENST00000471260 SMIM3Q9BZL3 60 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 TMEM231Q9H6L2 316 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 WFDC1Q9HC57 220 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 C19orf73Q9NVV2 129 aa10.27□□□□□ -0.77
HMGN1-211ENST00000471260 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 LGALS9O00182 355 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 GGCTO75223 188 aaKnown RBP10.26□□□□□ -0.77
HMGN1-211ENST00000471260 OR2J3O76001 311 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 TAS2R30P59541 319 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 RAB5BP61020 215 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 SSX9Q7RTT3 188 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 GTSCR1Q86UQ5 136 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 HAPLN4Q86UW8 402 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 GPHA2Q96T91 129 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 ATP5SQ99766 215 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 SLC35B3Q9H1N7 401 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 FBXL7Q9UJT9 491 aa10.26□□□□□ -0.77
HMGN1-211ENST00000471260 TENM3Q9P273 2699 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 IGSF23A1L1A6 192 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
HMGN1-211ENST00000471260 MT-ND4LP03901 98 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 PPT1P50897 306 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 CLINT1Q14677 625 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 TMEM88Q6PEY1 159 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 TM2D3Q9BRN9 247 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
HMGN1-211ENST00000471260 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms