RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZNF708P17019 499 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 H2BFSP57053 126 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 ZNF124Q15973 351 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 PSG3Q16557 428 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 DUSP15Q9H1R2 295 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 PLAC1Q9HBJ0 212 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 MYH1P12882 1939 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 CXorf51AA0A1B0GTR3 108 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 ERVH48-1M5A8F1 160 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 WNT2P09544 360 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 KLF17Q5JT82 389 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 MAST2Q6P0Q8 1798 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 WFDC6Q9BQY6 131 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 SAA2-SAA4A0A096LPE2 208 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 C1QAP02745 245 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 CXCL10P02778 98 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 SAA2P0DJI9 122 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 SEC61GP60059 68 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 NDPQ00604 133 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 IRF3Q14653 427 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 KIR3DS1Q14943 382 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 C3orf56Q8N813 242 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 DEPPQ9NTK1 212 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 FOXD3Q9UJU5 478 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-210ENST00000471181 TAF1P21675 1872 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 CTSBP07858 339 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 HOXB1P14653 301 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-210ENST00000471181 CCL3L1P16619 93 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 PRCDQ00LT1 54 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 C8orf31Q8N9H6 132 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 SLC25A28Q96A46 364 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 CCDC88AQ3V6T2 1871 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 MYH4Q9Y623 1939 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 SRRM4A7MD48 611 aaKnown RBP5.73□□□□□ -1.49
BRCA1-210ENST00000471181 FOXS1O43638 330 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 PEX11BO96011 259 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 MORN5Q5VZ52 161 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM219Q86XT9 240 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 SLX4Q8IY92 1834 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 IGHV4-28A0A0C4DH34 117 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 RPL34P49207 117 aaKnown RBP5.73□□□□□ -1.49
BRCA1-210ENST00000471181 ZNF501Q96CX3 271 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-210ENST00000471181 MYH13Q9UKX3 1938 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 VCYO14598 125 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 NDUFC2O95298 119 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 CCL20P78556 96 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 LYZL1Q6UWQ5 148 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-210ENST00000471181 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
BRCA1-210ENST00000471181 TRBV20-1A0A075B6N2 111 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 UPK2O00526 184 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 IFITM1P13164 125 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 CT83Q5H943 113 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 SPSB3Q6PJ21 355 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 ECM29Q5VYK3 1845 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 A0A0G2JMM0 328 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 A0A1W2PPB8 328 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 KIR3DP1A8MWS1 328 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 TFF1P04155 84 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 MPV17L2Q567V2 206 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 Q5BKY6 102 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 LAMA4Q16363 1823 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 GATA4P43694 442 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 DAD1P61803 113 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 MSRB2Q9Y3D2 182 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 IGLV1-36A0A0B4J1U3 117 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 IGHV3-16A0A0C4DH30 117 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 LYNX1G3V0Z9 82 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 SMKR1H3BMG3 65 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 OR9G9P0C7N8 305 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 LYNX1P0DP58 116 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 UCP1P25874 307 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 NHLRC3Q5JS37 347 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 LY6G5BQ8NDX9 201 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 KLHL30-AS1Q8NEE0 82 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 TSKUQ8WUA8 353 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 SLC25A39Q9BZJ4 359 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-210ENST00000471181 AKAP11Q9UKA4 1901 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 A0A087WWC5 75 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 A0A1W2PPV9 198 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 SH2D1AO60880 128 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 CECR9P0C854 216 aa5.72□□□□□ -1.49
BRCA1-210ENST00000471181 PTPRZ1P23471 2315 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-210ENST00000471181 IGHV4-4A0A075B6R2 117 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 LINC01549A6NIU2 74 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 C15orf61A6NNL5 157 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 THBDP07204 575 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 COX5BP10606 129 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 C1orf100Q5SVJ3 147 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM256Q8N2U0 113 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 ZNF525Q8N782 197 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 BMPERQ8N8U9 685 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 LINC00312Q9Y6C7 94 aa5.71□□□□□ -1.49
BRCA1-210ENST00000471181 DICER1Q9UPY3 1922 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms