RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CA7P43166 264 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 IER3P46695 156 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TCL1AP56279 114 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 ZNF672Q499Z4 452 aaPredicted RBP11.75□□□□□ -0.53
CBWD3-205ENST00000469687 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TMEM18Q96B42 140 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
CBWD3-205ENST00000469687 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 SIGLEC9Q9Y336 463 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 ORM2P19652 201 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TIGITQ495A1 244 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 DNLZQ5SXM8 178 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 LINC00305Q7Z4B0 112 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TEX45Q8NA69 505 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 CLEC7AQ9BXN2 247 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 MRPL18Q9H0U6 180 aaKnown RBP11.75□□□□□ -0.53
CBWD3-205ENST00000469687 TNFRSF19Q9NS68 423 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-205ENST00000469687 CA1P00915 261 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-205ENST00000469687 GCGP01275 180 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 MRPL41Q8IXM3 137 aaKnown RBP11.74□□□□□ -0.53
CBWD3-205ENST00000469687 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 RNF2Q99496 336 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 SNURFLB1AK76 121 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 F2Z2F3 143 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 CRYGCP07315 174 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 COMPP49747 757 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-205ENST00000469687 PRRX1P54821 245 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 CASP6P55212 293 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 LINC00310P59036 64 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 BPIFB3P59826 476 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 MSRB2Q9Y3D2 182 aa11.74□□□□□ -0.53
CBWD3-205ENST00000469687 SPTBN4Q9H254 2564 aa11.73□□□□□ -0.53
CBWD3-205ENST00000469687 FCN1O00602 326 aa11.73□□□□□ -0.53
CBWD3-205ENST00000469687 GNG5P63218 68 aa11.73□□□□□ -0.53
CBWD3-205ENST00000469687 ADORA2A-AS1P86434 159 aa11.73□□□□□ -0.53
CBWD3-205ENST00000469687 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
CBWD3-205ENST00000469687 AMMECR1Q9Y4X0 333 aaPredicted RBP11.73□□□□□ -0.53
CBWD3-205ENST00000469687 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 TEX22C9J3V5 150 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 PKIAP61925 76 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 IBA57Q5T440 356 aaKnown RBP11.72□□□□□ -0.53
CBWD3-205ENST00000469687 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 FAM168AQ92567 244 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 RPEQ96AT9 228 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 ONECUT1Q9UBC0 465 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
CBWD3-205ENST00000469687 SELENOTP62341 195 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
CBWD3-205ENST00000469687 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 BEND2Q8NDZ0 799 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 BLNKQ8WV28 456 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 SGK494Q96LW2 274 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 SSBP3Q9BWW4 388 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-205ENST00000469687 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
CBWD3-205ENST00000469687 ISLRO14498 428 aa11.71□□□□□ -0.53
CBWD3-205ENST00000469687 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
CBWD3-205ENST00000469687 H3BTX0 84 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 PEX7O00628 323 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 CD33P20138 364 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 DDTP30046 118 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 CX3CL1P78423 397 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 DEFA6Q01524 100 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-205ENST00000469687 ZFHX3Q15911 3703 aa11.71□□□□□ -0.54
CBWD3-205ENST00000469687 TSTD3H0UI37 97 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 SERF1AO75920 110 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 MRPL54Q6P161 138 aaKnown RBP11.7□□□□□ -0.54
CBWD3-205ENST00000469687 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 SRSF12Q8WXF0 261 aaKnown RBP11.7□□□□□ -0.54
CBWD3-205ENST00000469687 OR8B2Q96RD0 313 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 WNK2Q9Y3S1 2297 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
CBWD3-205ENST00000469687 LY6LH3BQJ8 138 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 CRISP2P16562 243 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 CD24P25063 80 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 MYCNOSP40205 109 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 ARF6P62330 175 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 TRGV9Q99603 122 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
CBWD3-205ENST00000469687 TIMM23O14925 209 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 TAS2R60P59551 318 aa11.69□□□□□ -0.54
CBWD3-205ENST00000469687 KLRD1Q13241 179 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms