RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SMPXQ9UHP9 88 aa1.8□□□□□ -2.12
SMC4-208ENST00000467468 LHFPL6Q9Y693 200 aa1.8□□□□□ -2.12
SMC4-208ENST00000467468 RIC1Q4ADV7 1423 aa1.8□□□□□ -2.12
SMC4-208ENST00000467468 KIF1BO60333 1816 aa1.8□□□□□ -2.12
SMC4-208ENST00000467468 CPAMD8Q8IZJ3 1885 aa1.8□□□□□ -2.12
SMC4-208ENST00000467468 GREB1Q4ZG55 1949 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 TMEM212A6NML5 194 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 SHBGP04278 402 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 CTSDP07339 412 aaPredicted RBP1.79□□□□□ -2.12
SMC4-208ENST00000467468 SERPINB1P30740 379 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 RNASE4P34096 147 aaKnown RBP1.79□□□□□ -2.12
SMC4-208ENST00000467468 EIF5AP63241 154 aaKnown RBP1.79□□□□□ -2.12
SMC4-208ENST00000467468 DR1Q01658 176 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 TSNQ15631 228 aaKnown RBP1.79□□□□□ -2.12
SMC4-208ENST00000467468 OR4E2Q8NGC2 313 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 LYSMD1Q96S90 227 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 SERPINI1Q99574 410 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 HIST1H2BLQ99880 126 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 TMEM70Q9BUB7 260 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 PBDC1Q9BVG4 233 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 DISP1Q96F81 1524 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 UNC13AQ9UPW8 1703 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 MALRD1Q5VYJ5 2156 aa1.79□□□□□ -2.12
SMC4-208ENST00000467468 DOCK3Q8IZD9 2030 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 ZNF106Q9H2Y7 1883 aaKnown RBP1.78□□□□□ -2.12
SMC4-208ENST00000467468 SYNMO15061 1565 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 MED1Q15648 1581 aaPredicted RBP1.78□□□□□ -2.12
SMC4-208ENST00000467468 DUXBA0A1W2PPF3 345 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 C7orf71A4D174 169 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 IDO1P14902 403 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 SRP14P37108 136 aaKnown RBP1.78□□□□□ -2.12
SMC4-208ENST00000467468 DEFB103AP81534 67 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 ZNF826PQ6ZT77 177 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 C7orf65Q6ZTY9 151 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 STAG3L4Q8TBR4 150 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 MALSU1Q96EH3 234 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 GPER1Q99527 375 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 YIPF3Q9GZM5 350 aa1.78□□□□□ -2.12
SMC4-208ENST00000467468 SCN10AQ9Y5Y9 1956 aa1.78□□□□□ -2.13
SMC4-208ENST00000467468 VWDEQ8N2E2 1590 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 TONSLQ96HA7 1378 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 MEIKINA0A087WXM9 373 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 TAX1BP3O14907 124 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 BANF1O75531 89 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.77□□□□□ -2.13
SMC4-208ENST00000467468 OR4D11Q8NGI4 311 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 OR13D1Q8NGV5 346 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 ANP32BQ92688 251 aaKnown RBP1.77□□□□□ -2.13
SMC4-208ENST00000467468 YPEL2Q96QA6 119 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 NHP2Q9NX24 153 aaKnown RBP1.77□□□□□ -2.13
SMC4-208ENST00000467468 PLXNA3P51805 1871 aa1.77□□□□□ -2.13
SMC4-208ENST00000467468 YTHDC2Q9H6S0 1430 aaKnown RBP1.76□□□□□ -2.13
SMC4-208ENST00000467468 RIIAD1A6NNX1 92 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 M0R378 163 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 APOA2P02652 100 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 Q1T7F1 81 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 BCL2L15Q5TBC7 163 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 CANT1Q8WVQ1 401 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 AQP3Q92482 292 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 TMEM126AQ9H061 195 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 SLC35A3Q9Y2D2 325 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 STRCP1A6NGW2 1772 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 MYO9BQ13459 2157 aa1.76□□□□□ -2.13
SMC4-208ENST00000467468 IGKV1D-42A0A075B6H8 117 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 A0A1B0GV72 72 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 GPR31O00270 319 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 CST8O60676 142 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 FKBP2P26885 142 aaKnown RBP1.75□□□□□ -2.13
SMC4-208ENST00000467468 GLRXP35754 106 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 TFAMQ00059 246 aaKnown RBP1.75□□□□□ -2.13
SMC4-208ENST00000467468 ELOBQ15370 118 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 SNCBQ16143 134 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 PCOTHQ58A44 107 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 C22orf39Q6P5X5 142 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
SMC4-208ENST00000467468 SMIM15Q7Z3B0 74 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 PLEKHB2Q96CS7 222 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 TAS2R4Q9NYW5 299 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 PCTPQ9UKL6 214 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 ECM29Q5VYK3 1845 aa1.75□□□□□ -2.13
SMC4-208ENST00000467468 UHRF1BP1Q6BDS2 1440 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 PBRM1Q86U86 1689 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 TRGV10A0A0A0MS01 117 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 F8W036 122 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 H0YJX3 145 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 GGCTO75223 188 aaKnown RBP1.74□□□□□ -2.13
SMC4-208ENST00000467468 CSN2P05814 226 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 UBBP0CG47 229 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 AKR1C3P42330 323 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 ZNF846Q147U1 533 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 SPANXN5Q5MJ07 72 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 TMEM78Q5T7P6 136 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 COA5Q86WW8 74 aa1.74□□□□□ -2.13
SMC4-208ENST00000467468 LINC00471Q8N535 108 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms