RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 NCALDP61601 193 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 HSPE1P61604 102 aaKnown RBP1.6□□□□□ -2.15
VPS13A-209ENST00000467124 GNG5P63218 68 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 SNCBQ16143 134 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 LYRM7Q5U5X0 104 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 EXOC3-AS1Q8N2X6 119 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 C10orf126Q8N4M7 172 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 SMIM20Q8N5G0 67 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 OR10J5Q8NHC4 309 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 HIST1H2BLQ99880 126 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 YIPF3Q9GZM5 350 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 CCDC88CQ9P219 2028 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 SORL1Q92673 2214 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 GLI3P10071 1580 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 MYH11P35749 1972 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 G3V2T6 193 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 RPSAP08865 295 aaKnown RBP1.59□□□□□ -2.15
VPS13A-209ENST00000467124 S100A5P33763 92 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 KRR1Q13601 381 aaKnown RBP1.59□□□□□ -2.15
VPS13A-209ENST00000467124 OR13D1Q8NGV5 346 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 PARVBQ9HBI1 364 aa1.59□□□□□ -2.15
VPS13A-209ENST00000467124 COL5A3P25940 1745 aaPredicted RBP1.59□□□□□ -2.16
VPS13A-209ENST00000467124 DISP1Q96F81 1524 aa1.59□□□□□ -2.16
VPS13A-209ENST00000467124 RTTNQ86VV8 2226 aa1.59□□□□□ -2.16
VPS13A-209ENST00000467124 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
VPS13A-209ENST00000467124 ECM29Q5VYK3 1845 aa1.59□□□□□ -2.16
VPS13A-209ENST00000467124 TRAV14DV4A0A0A6YYC5 116 aa1.58□□□□□ -2.16
VPS13A-209ENST00000467124 TCL1BO95988 128 aa1.58□□□□□ -2.16
VPS13A-209ENST00000467124 SRP14P37108 136 aaKnown RBP1.58□□□□□ -2.16
VPS13A-209ENST00000467124 EIF5AP63241 154 aaKnown RBP1.58□□□□□ -2.16
VPS13A-209ENST00000467124 CDK5R1Q15078 307 aa1.58□□□□□ -2.16
VPS13A-209ENST00000467124 ZNF563Q8TA94 476 aa1.58□□□□□ -2.16
VPS13A-209ENST00000467124 TRBV19A0A075B6N1 114 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 IFNA7P01567 189 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 C1QBP02746 253 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 SSR2P43308 183 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 SURF2Q15527 256 aaPredicted RBP1.57□□□□□ -2.16
VPS13A-209ENST00000467124 BRMS1LQ5PSV4 323 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 SOSTDC1Q6X4U4 206 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 ZNF826PQ6ZT77 177 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 LYG2Q86SG7 212 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 OR13C6PQ8NH95 151 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 NEK7Q8TDX7 302 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 SLAMF6Q96DU3 332 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 SERPINI1Q99574 410 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 PRNDQ9UKY0 176 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 PYCARDQ9ULZ3 195 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 CAMSAP1Q5T5Y3 1602 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 RP1P56715 2156 aa1.57□□□□□ -2.16
VPS13A-209ENST00000467124 MICAL3Q7RTP6 2002 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 MEIKINA0A087WXM9 373 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 TAX1BP3O14907 124 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 IFNA1P01562 189 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 GNG3P63215 75 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 TSNQ15631 228 aaKnown RBP1.56□□□□□ -2.16
VPS13A-209ENST00000467124 RRN3P1Q2M238 152 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 DEFB128Q7Z7B8 93 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 TMED4Q7Z7H5 227 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 LINC00311Q8N616 119 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 PRADC1Q9BSG0 188 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 REG4Q9BYZ8 158 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 TMEM133Q9H2Q1 129 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 PCTPQ9UKL6 214 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 RIC1Q4ADV7 1423 aa1.56□□□□□ -2.16
VPS13A-209ENST00000467124 GADD45GO95257 159 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 NDUFC2O95298 119 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 COX6A1P12074 109 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
VPS13A-209ENST00000467124 DYNLT1P63172 113 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 OR4D11Q8NGI4 311 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 NAA38Q9BRA0 125 aaKnown RBP1.55□□□□□ -2.16
VPS13A-209ENST00000467124 GINS3Q9BRX5 216 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 ADAT1Q9BUB4 502 aaKnown RBP1.55□□□□□ -2.16
VPS13A-209ENST00000467124 BCL2L10Q9HD36 194 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 TAS2R4Q9NYW5 299 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 EPDR1Q9UM22 224 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 UFC1Q9Y3C8 167 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 MED1Q15648 1581 aaPredicted RBP1.55□□□□□ -2.16
VPS13A-209ENST00000467124 SMARCA4P51532 1647 aa1.55□□□□□ -2.16
VPS13A-209ENST00000467124 FBN1P35555 2871 aaKnown RBP1.54□□□□□ -2.16
VPS13A-209ENST00000467124 E5RI56 91 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 TMEM256-PLSCR3K7ERE1 68 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 OR2T1O43869 369 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 MFSD11O43934 449 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 PIAS1O75925 651 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 PHBP35232 272 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 CRYBA4P53673 196 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 VBP1P61758 197 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 DEFB113Q30KQ7 82 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 AKR1C8PQ5T2L2 129 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 RPS19BP1Q86WX3 136 aaKnown RBP1.54□□□□□ -2.16
VPS13A-209ENST00000467124 PDZD9Q8IXQ8 264 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 Q8N2B8 174 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 SLC30A7Q8NEW0 376 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 PBDC1Q9BVG4 233 aa1.54□□□□□ -2.16
VPS13A-209ENST00000467124 C6orf62Q9GZU0 229 aaPredicted RBP1.54□□□□□ -2.16
VPS13A-209ENST00000467124 IL20Q9NYY1 176 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms