RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ZNF404Q494X3 552 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF493Q6ZR52 646 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 DNM1P46Q6ZS02 220 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 RFLNAQ6ZTI6 216 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 HSD17B13Q7Z5P4 300 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 YIPF7Q8N8F6 280 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 TMEM75Q8N9X5 138 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 OR11H7Q8NGC8 314 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 OR9G1Q8NH87 305 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 LRRC29Q8WV35 223 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 MBD3L1Q8WWY6 194 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 TMEM106AQ96A25 262 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 ERMAPQ96PL5 475 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 LINC01587Q99440 93 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 NKX6-2Q9C056 277 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 SLC25A31Q9H0C2 315 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 OR2D2Q9H210 308 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 SCN3BQ9NY72 215 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 DPM3Q9P2X0 92 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 METTL1Q9UBP6 276 aaKnown RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF230Q9UIE0 474 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 UGT2A1Q9Y4X1 527 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 F11RQ9Y624 299 aaKnown RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 PXMP4Q9Y6I8 212 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF638Q14966 1978 aaKnown RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 LRRK2Q5S007 2527 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 MYO5AQ9Y4I1 1855 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 DOCK4Q8N1I0 1966 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 FLNCQ14315 2725 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TDRD6O60522 2096 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 SETD2Q9BYW2 2564 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TRBV19A0A075B6N1 114 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TMEM269A0A1B0GVZ9 245 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TRDV1A0A1B0GX56 115 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ZFP92A6NM28 416 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 OR4C45A6NMZ5 311 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 H3BQF6 201 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 OVOL1O14753 267 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 AGPAT2O15120 278 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TNFSF13O75888 250 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PRB1P04280 392 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF728P0DKX0 622 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 SMIM17P0DL12 118 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 IGHV3-43DP0DP04 118 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 FGF7P21781 194 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 GADD45AP24522 165 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 FKBP2P26885 142 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 CMPK1P30085 196 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 GABRA3P34903 492 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PPP1CCP36873 323 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 DEFA3P59666 94 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 RPS11P62280 158 aaKnown RBP eCLIP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 REG3AQ06141 175 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 CST6Q15828 149 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF141Q15928 474 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 LRRC10Q5BKY1 277 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 HES3Q5TGS1 186 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 GLIPR1L1Q6UWM5 242 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ACP7Q6ZNF0 438 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ATP5L2Q7Z4Y8 100 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 C8orf59Q8N0T1 100 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 OR8I2Q8N0Y5 310 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ANKRD29Q8N6D5 301 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 OR52R1Q8NGF1 315 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 FRZBQ92765 325 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ISOC1Q96CN7 298 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 MALSU1Q96EH3 234 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PRADC1Q9BSG0 188 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PSMG3Q9BT73 122 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 THTPAQ9BU02 230 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 SFXN3Q9BWM7 321 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 GABARAPL3Q9BY60 117 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PTGES2Q9H7Z7 377 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 CACYBPQ9HB71 228 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 TAF9BQ9HBM6 251 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF331Q9NQX6 463 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PARP11Q9NR21 331 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 MARCH5Q9NX47 278 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 OR5AC2Q9NZP5 309 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 BOKQ9UMX3 212 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 BAIAP2Q9UQB8 552 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 CYSLTR1Q9Y271 337 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 PCYT1BQ9Y5K3 369 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 LRBAP50851 2863 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 SPTBN1Q01082 2364 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ITPR2Q14571 2701 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 ASCC3Q8N3C0 2202 aaKnown RBP2.45□□□□□ -2.02
CCDC58-203ENST00000466854 LAMA4Q16363 1823 aa2.45□□□□□ -2.02
CCDC58-203ENST00000466854 CELSR1Q9NYQ6 3014 aa2.44□□□□□ -2.02
CCDC58-203ENST00000466854 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
CCDC58-203ENST00000466854 MGAQ8IWI9 3026 aa2.44□□□□□ -2.02
CCDC58-203ENST00000466854 MYH9P35579 1960 aaKnown RBP2.44□□□□□ -2.02
CCDC58-203ENST00000466854 hCG_1818297A0A087WSY0 165 aa2.44□□□□□ -2.02
CCDC58-203ENST00000466854 RIIAD1A6NNX1 92 aa2.44□□□□□ -2.02
CCDC58-203ENST00000466854 A8MT66 165 aa2.44□□□□□ -2.02
CCDC58-203ENST00000466854 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
CCDC58-203ENST00000466854 H0YJW9 148 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms