RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SSR2P43308 183 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 SERPINB9P50453 376 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 YPEL3P61236 119 aaPredicted RBP0.68□□□□□ -2.3
SSB-207ENST00000465871 CCL7P80098 99 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 C12orf74Q32Q52 190 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 LINC01554Q52M75 96 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 TEX36Q5VZQ5 186 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.68□□□□□ -2.3
SSB-207ENST00000465871 OR13D1Q8NGV5 346 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 NMNAT1Q9HAN9 279 aaPredicted RBP0.68□□□□□ -2.3
SSB-207ENST00000465871 ENY2Q9NPA8 101 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 TAS2R4Q9NYW5 299 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 TVP23BQ9NYZ1 205 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 IDI2-AS1Q9NZ38 188 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 HECW2Q9P2P5 1572 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 ARL2BPQ9Y2Y0 163 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 TOPBP1Q92547 1522 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 SMARCA4P51532 1647 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 RIC1Q4ADV7 1423 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 C2orf70A6NJV1 201 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 GEMIN2O14893 280 aaKnown RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 HCRTO43612 131 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 OR1I1O60431 355 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 ATP5HO75947 161 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 OR7C1O76099 320 aaPredicted RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 PROSCO94903 275 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 HAND1O96004 215 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 OR4E1P0C645 316 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 BAALC-AS2P0C853 105 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 ERP29P30040 261 aaKnown RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 RAB4BP61018 213 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 EIF5AP63241 154 aaKnown RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 MRPS25P82663 173 aaKnown RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 PLCXD2Q0VAA5 305 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 FADDQ13158 208 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 LIN52Q52LA3 116 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 LYRM7Q5U5X0 104 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 Q6Q795 121 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 S100A7AQ86SG5 101 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 OR52L1Q8NGH7 329 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 OR4C6Q8NH72 309 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 WFDC5Q8TCV5 224 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 GNPDA2Q8TDQ7 276 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 FAM172AQ8WUF8 416 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 SFT2D1Q8WV19 159 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 C2orf50Q96LR7 162 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 PRAP1Q96NZ9 151 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 ODF3Q96PU9 254 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 PHB2Q99623 299 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 HIST1H2BLQ99880 126 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 C6orf62Q9GZU0 229 aaPredicted RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 MIXL1Q9H2W2 232 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 NHP2Q9NX24 153 aaKnown RBP0.67□□□□□ -2.3
SSB-207ENST00000465871 KLK9Q9UKQ9 250 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 HECW1Q76N89 1606 aa0.67□□□□□ -2.3
SSB-207ENST00000465871 CCDC144AA2RUR9 1427 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 POLEQ07864 2286 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 A0A087WX48 190 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 TRBV6-7A0A0A0MS04 114 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 J3QRK9 145 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 OR2T1O43869 369 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 CST8O60676 142 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 HYPMO75409 117 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 SERPINA1P01009 418 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 IFNA6P05013 189 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 CTXN2P0C2S0 81 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 RNASE3P12724 160 aaKnown RBP0.66□□□□□ -2.3
SSB-207ENST00000465871 MIFP14174 115 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 SRIP30626 198 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 SRP14P37108 136 aaKnown RBP0.66□□□□□ -2.3
SSB-207ENST00000465871 ANP32AP39687 249 aaKnown RBP0.66□□□□□ -2.3
SSB-207ENST00000465871 RHOGP84095 191 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 AKIRIN2Q53H80 203 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 BRMS1LQ5PSV4 323 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 LCA10Q71F78 164 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 CLECL1Q8IZS7 167 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 C12orf45Q8N5I9 185 aaPredicted RBP0.66□□□□□ -2.3
SSB-207ENST00000465871 CEP19Q96LK0 163 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 C9orf16Q9BUW7 83 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 OPTCQ9UBM4 332 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 EPDR1Q9UM22 224 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 ZNF469Q96JG9 3925 aaPredicted RBP0.66□□□□□ -2.3
SSB-207ENST00000465871 SCN10AQ9Y5Y9 1956 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 RTL1A6NKG5 1358 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 TECTAO75443 2155 aa0.66□□□□□ -2.3
SSB-207ENST00000465871 PIK3C2GO75747 1445 aa0.65□□□□□ -2.3
SSB-207ENST00000465871 TRBV6-8A0A0A6YYG3 113 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 C7orf71A4D174 169 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 CCDC160A6NGH7 325 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 TMEM210A6NLX4 147 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 HMGB3O15347 200 aaKnown RBP0.65□□□□□ -2.31
SSB-207ENST00000465871 LYZL6O75951 148 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 PIGPP57054 158 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 ERVS71-1P61550 626 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 KRR1Q13601 381 aaKnown RBP0.65□□□□□ -2.31
SSB-207ENST00000465871 TSNQ15631 228 aaKnown RBP0.65□□□□□ -2.31
SSB-207ENST00000465871 ESRGQ1W209 222 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 TEX261Q6UWH6 196 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 FAM19A2Q8N3H0 131 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 LINC00301Q8NCQ3 95 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms