RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DAD1P61803 113 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 IZUMO4Q1ZYL8 232 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 GSG1LQ6UXU4 331 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 HERC1Q15751 4861 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 RPS10-NUDT3A0A1W2PQS6 291 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 HBE1P02100 147 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 HRH1P35367 487 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 ETV6P41212 452 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 TAS2R20P59543 309 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 NRG4Q8WWG1 115 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
SMC1A-204ENST00000463684 A0A0B4J293 547 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 ATG12O94817 140 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 HLA-DMAP28067 261 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 AKR1C2P52895 323 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-204ENST00000463684 DHODHQ02127 395 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 TMEM69Q5SWH9 247 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
SMC1A-204ENST00000463684 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
SMC1A-204ENST00000463684 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
SMC1A-204ENST00000463684 LOC102723971A0A1B0GUV8 181 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 GSTZ1O43708 216 aaPredicted RBP10.22□□□□□ -0.77
SMC1A-204ENST00000463684 TMEM127O75204 238 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 OR10J1P30954 320 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 PRSS3P35030 304 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 UCP3P55916 312 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 FCGR1BQ92637 280 aa10.22□□□□□ -0.77
SMC1A-204ENST00000463684 LOC100506127A0A0U1RQW1 187 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 BUB3O43684 328 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 IGKV1-5P01602 117 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 IL4P05112 153 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 IGLC1P0CG04 106 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 ID1P41134 155 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 HSPA13P48723 471 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 GABARAPL2P60520 117 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 GDF5OSQ5U4N7 250 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 FOXI2Q6ZQN5 318 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 SPARTQ8N0X7 666 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 LINC00052Q96N35 136 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 CLUHP3Q96NS8 147 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 VCX3BQ9H321 246 aa10.21□□□□□ -0.77
SMC1A-204ENST00000463684 SAV1Q9H4B6 383 aaPredicted RBP10.21□□□□□ -0.77
SMC1A-204ENST00000463684 SLC25A4P12235 298 aa10.2□□□□□ -0.78
SMC1A-204ENST00000463684 HTR2BP41595 481 aa10.2□□□□□ -0.78
SMC1A-204ENST00000463684 RND2P52198 227 aa10.2□□□□□ -0.78
SMC1A-204ENST00000463684 CCL18P55774 89 aa10.2□□□□□ -0.78
SMC1A-204ENST00000463684 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
SMC1A-204ENST00000463684 UBE2NLQ5JXB2 153 aa10.2□□□□□ -0.78
SMC1A-204ENST00000463684 NUDT3O95989 172 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 RD3LP0DJH9 198 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 PGAM2P15259 253 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 DEFB1P60022 68 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 PSG9Q00887 426 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 SPATA31B1PQ5VZV4 182 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 PRSS54Q6PEW0 395 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 C1orf158Q8N1D5 194 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 ZNF709Q8N972 641 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
SMC1A-204ENST00000463684 TMEM208Q9BTX3 173 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 SLC35B3Q9H1N7 401 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 SCPEP1Q9HB40 452 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
SMC1A-204ENST00000463684 APOBP04114 4563 aaKnown RBP10.18□□□□□ -0.78
SMC1A-204ENST00000463684 P0C879 139 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 NUP62P37198 522 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-204ENST00000463684 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 ETFRF1Q6IPR1 90 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 EBLN2Q6P2I7 272 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 IZUMO2Q6UXV1 221 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 RNASE11Q8TAA1 199 aaKnown RBP10.18□□□□□ -0.78
SMC1A-204ENST00000463684 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
SMC1A-204ENST00000463684 TP53RKQ96S44 253 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-204ENST00000463684 KLK11Q9UBX7 282 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
SMC1A-204ENST00000463684 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 M0QYG6 137 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 TOMM40O96008 361 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 PSMB3P49720 205 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 RORCP51449 518 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 PIGPP57054 158 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 SPCS3P61009 180 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 RND3P61587 244 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 ZNF79Q15937 498 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 TRIM16LQ309B1 348 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms