RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 EWSR1Q01844 656 aaKnown RBP eCLIP17.27■□□□□ 0.36
SSNA1-203ENST00000463511 OXA1LQ15070 435 aa17.27■□□□□ 0.36
SSNA1-203ENST00000463511 C2orf83Q53S99 150 aa17.27■□□□□ 0.36
SSNA1-203ENST00000463511 TMEM170AQ8WVE7 144 aa17.27■□□□□ 0.36
SSNA1-203ENST00000463511 C2orf50Q96LR7 162 aa17.27■□□□□ 0.36
SSNA1-203ENST00000463511 ALG5Q9Y673 324 aa17.27■□□□□ 0.36
SSNA1-203ENST00000463511 TRBV7-1A0A0A6YYK4 115 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 NUPR2A6NF83 97 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 IAPPP10997 89 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 GPR183P32249 361 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 NKX2-1P43699 371 aaPredicted RBP17.26■□□□□ 0.35
SSNA1-203ENST00000463511 GSG1LQ6UXU4 331 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 RBPMS2Q6ZRY4 209 aaKnown RBP17.26■□□□□ 0.35
SSNA1-203ENST00000463511 SLC24A4Q8NFF2 622 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 ZNF502Q8TBZ5 544 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 SCARB1Q8WTV0 552 aa17.26■□□□□ 0.35
SSNA1-203ENST00000463511 IGHV3-35A0A0C4DH35 117 aa17.25■□□□□ 0.35
SSNA1-203ENST00000463511 CLEC3BP05452 202 aa17.25■□□□□ 0.35
SSNA1-203ENST00000463511 POLR2GP62487 172 aaKnown RBP eCLIP17.25■□□□□ 0.35
SSNA1-203ENST00000463511 U3KQ87 197 aa17.25■□□□□ 0.35
SSNA1-203ENST00000463511 TRAV25A0A0B4J276 109 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 WRBO00258 174 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 GOSR2O14653 212 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 SIX6O95475 246 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 MT-CO2P00403 227 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 IFNA10P01566 189 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 NPY1RP25929 384 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 IL15RAQ13261 267 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 MARC2Q969Z3 335 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 PINX1Q96BK5 328 aaKnown RBP17.24■□□□□ 0.35
SSNA1-203ENST00000463511 UBQLN2Q9UHD9 624 aa17.24■□□□□ 0.35
SSNA1-203ENST00000463511 KMT2AQ03164 3969 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 F8W735 103 aaPredicted RBP17.23■□□□□ 0.35
SSNA1-203ENST00000463511 SSNA1O43805 119 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 SCGB1D2O95969 90 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 IGHV3-48P01763 117 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 MBPP02686 304 aaPredicted RBP17.23■□□□□ 0.35
SSNA1-203ENST00000463511 C8orf88P0DMB2 117 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 MLANAQ16655 118 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 DEFB135Q30KP9 77 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 WFDC3Q8IUB2 231 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 CIB3Q96Q77 187 aaPredicted RBP17.23■□□□□ 0.35
SSNA1-203ENST00000463511 FNDC4Q9H6D8 234 aaPredicted RBP17.23■□□□□ 0.35
SSNA1-203ENST00000463511 C21orf62Q9NYP8 219 aa17.23■□□□□ 0.35
SSNA1-203ENST00000463511 CORTO00230 105 aa17.22■□□□□ 0.35
SSNA1-203ENST00000463511 SPRY2O43597 315 aa17.22■□□□□ 0.35
SSNA1-203ENST00000463511 APOC4P55056 127 aa17.22■□□□□ 0.35
SSNA1-203ENST00000463511 MRPL27Q9P0M9 148 aaKnown RBP17.22■□□□□ 0.35
SSNA1-203ENST00000463511 TP53TG1Q9Y2A0 90 aa17.22■□□□□ 0.35
SSNA1-203ENST00000463511 UFC1Q9Y3C8 167 aa17.22■□□□□ 0.35
SSNA1-203ENST00000463511 C15orf62A8K5M9 175 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 BMI1P35226 326 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 PAX9P55771 341 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 ATP5IP56385 69 aaPredicted RBP17.21■□□□□ 0.35
SSNA1-203ENST00000463511 CEMP1Q6PRD7 247 aaPredicted RBP17.21■□□□□ 0.35
SSNA1-203ENST00000463511 Q6ZWC4 215 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 NOXA1Q86UR1 476 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 RNASEH2CQ8TDP1 164 aaKnown RBP17.21■□□□□ 0.35
SSNA1-203ENST00000463511 ATP6V0BQ99437 205 aa17.21■□□□□ 0.35
SSNA1-203ENST00000463511 RCL1Q9Y2P8 373 aaKnown RBP17.21■□□□□ 0.35
SSNA1-203ENST00000463511 SSSCA1O60232 199 aa17.2■□□□□ 0.34
SSNA1-203ENST00000463511 TMEM50AO95807 157 aa17.2■□□□□ 0.34
SSNA1-203ENST00000463511 FCGR2BP31994 310 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-203ENST00000463511 MFAP4P55083 255 aa17.2■□□□□ 0.34
SSNA1-203ENST00000463511 ELLP55199 621 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-203ENST00000463511 SMIM8Q96KF7 97 aa17.2■□□□□ 0.34
SSNA1-203ENST00000463511 SPAG8Q99932 426 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-203ENST00000463511 KRTAP17-1Q9BYP8 105 aa17.2■□□□□ 0.34
SSNA1-203ENST00000463511 K7EPK0 472 aa17.19■□□□□ 0.34
SSNA1-203ENST00000463511 OPRK1P41145 380 aa17.19■□□□□ 0.34
SSNA1-203ENST00000463511 TXN2Q99757 166 aa17.19■□□□□ 0.34
SSNA1-203ENST00000463511 ZNF436Q9C0F3 470 aaPredicted RBP17.19■□□□□ 0.34
SSNA1-203ENST00000463511 PSENENQ9NZ42 101 aa17.19■□□□□ 0.34
SSNA1-203ENST00000463511 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
SSNA1-203ENST00000463511 MGAT4CQ9UBM8 478 aa17.19■□□□□ 0.34
SSNA1-203ENST00000463511 OR2T8A6NH00 312 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 TGOLN2O43493 480 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 H2BFSP57053 126 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 Q56UQ5 140 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 SPANXN5Q5MJ07 72 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 TMEM190Q8WZ59 177 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 RAB40CQ96S21 281 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 C11orf1Q9H5F2 150 aa17.18■□□□□ 0.34
SSNA1-203ENST00000463511 LSM5Q9Y4Y9 91 aaKnown RBP17.18■□□□□ 0.34
SSNA1-203ENST00000463511 H3BP45 60 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 IFNA4P05014 189 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 RPP30P78346 268 aaKnown RBP17.17■□□□□ 0.34
SSNA1-203ENST00000463511 RAB32Q13637 225 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 ODF3L2Q3SX64 289 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 RPP25LQ8N5L8 163 aaKnown RBP17.17■□□□□ 0.34
SSNA1-203ENST00000463511 UBAC2Q8NBM4 344 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 NMES1Q9C002 83 aa17.17■□□□□ 0.34
SSNA1-203ENST00000463511 RPS10-NUDT3A0A1W2PQS6 291 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 UBE2CO00762 179 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 TSPAN4O14817 238 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 CTSGP08311 255 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 ADMP35318 185 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 TAS2R30P59541 319 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 RAB11AP62491 216 aa17.16■□□□□ 0.34
SSNA1-203ENST00000463511 BSCL2Q96G97 398 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms