RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 BTNL8Q6UX41 500 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 LINC00299Q6ZSB3 139 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 UXS1Q8NBZ7 420 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 TECRQ9NZ01 308 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 TBC1D24Q9ULP9 559 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 A0A1B0GU03 582 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 CORTO00230 105 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 LYRM1O43325 122 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 ZNF207O43670 478 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 LY6G6CO95867 125 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR4E1P0C645 316 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 SLC25A6P12236 298 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 ANXA7P20073 488 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 NPY1RP25929 384 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 SNCAP37840 140 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 HTR2BP41595 481 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 INPP1P49441 399 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 DHRS2Q13268 280 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 GGNBP1Q5YKI7 109 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 LYG2Q86SG7 212 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 SLC24A4Q8NFF2 622 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 DTD1Q8TEA8 209 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 MARC2Q969Z3 335 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR10C1Q96KK4 312 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 CCDC32Q9BV29 185 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 GGTLC1Q9BX51 225 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 C20orf85Q9H1P6 137 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 RBKSQ9H477 322 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 ENY2Q9NPA8 101 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 DAZ1Q9NQZ3 744 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 PTTG2Q9NZH5 202 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 MRPL27Q9P0M9 148 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 UFC1Q9Y3C8 167 aa5.88□□□□□ -1.47
CDC42BPA-210ENST00000462553 A0A0J9YWU9 116 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 CEBPZOSA8MTT3 80 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 MPTX1A8MV57 137 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 K7EMT4 169 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 NUPL2O15504 423 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 GNG7O60262 68 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 CLN5O75503 358 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 ADAP1O75689 374 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 TMEM50AO95807 157 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGKV1-17P01599 117 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 HOXB5P09067 269 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 IAPPP10997 89 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 OPRK1P41145 380 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 SUB1P53999 127 aaKnown RBP eCLIP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 PMS2P11Q13670 270 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 PRSS54Q6PEW0 395 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 TOMM20LQ6UXN7 152 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 SLC16A13Q7RTY0 426 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 DUSP18Q8NEJ0 188 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR52B4Q8NGK2 314 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR4X1Q8NH49 305 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 RNASEH2CQ8TDP1 164 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 TMED3Q9Y3Q3 217 aa5.87□□□□□ -1.47
CDC42BPA-210ENST00000462553 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 LOC102724200A0A096LPH7 203 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGHV7-4-1A0A0J9YVY3 117 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 CXorf65A6NEN9 183 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 NUPR2A6NF83 97 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 CENPXA8MT69 81 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 FAM90A26D6RGX4 464 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 CHEK1O14757 476 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGLC1P0CG04 106 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 NPBWR1P48145 328 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 IFITM3Q01628 133 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 TIGITQ495A1 244 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 ZNF600Q6ZNG1 722 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 TMEM116Q8NCL8 245 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR4D5Q8NGN0 318 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR1S1Q8NH92 325 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 S100ZQ8WXG8 99 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 C20orf24Q9BUV8 137 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 CACFD1Q9UGQ2 172 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 SMPXQ9UHP9 88 aa5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 PUS1Q9Y606 427 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGHV3-49A0A0A0MS15 119 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 TRAV25A0A0B4J276 109 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 PIGBOS1A0A0B4J2F0 54 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 RPS10-NUDT3A0A1W2PQS6 291 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 A6NJY4 79 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 PRSS46E5RG02 174 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 TSPAN4O14817 238 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 UPK1BO75841 260 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 YIF1AO95070 293 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 APOHP02749 345 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 TCRBP04435 133 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 RND2P52198 227 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 ASAH1Q13510 395 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 DEFB135Q30KP9 77 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms