RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 DYNC1I1O14576 645 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 GNGT2O14610 69 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 FKBP6O75344 327 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 IGHV3-23P01764 117 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 CTSDP07339 412 aaPredicted RBP3.28□□□□□ -1.88
COPS3-204ENST00000462236 ZNF735P0CB33 412 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 SAA1P0DJI8 122 aaPredicted RBP3.28□□□□□ -1.88
COPS3-204ENST00000462236 CD37P11049 281 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 GTF2A1P52655 376 aaPredicted RBP3.28□□□□□ -1.88
COPS3-204ENST00000462236 RND3P61587 244 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 RPS11P62280 158 aaKnown RBP eCLIP3.28□□□□□ -1.88
COPS3-204ENST00000462236 MRPL28Q13084 256 aaKnown RBP3.28□□□□□ -1.88
COPS3-204ENST00000462236 ASAH1Q13510 395 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 TNXAQ16473 311 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 C10orf55Q5SWW7 151 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 XAF1Q6GPH4 301 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 MORN3Q6PF18 240 aaPredicted RBP3.28□□□□□ -1.88
COPS3-204ENST00000462236 GLIPR1L1Q6UWM5 242 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 IDO2Q6ZQW0 420 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 MOB1BQ7L9L4 216 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 LYPD1Q8N2G4 141 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 ZNF502Q8TBZ5 544 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 C18orf15Q96N68 181 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 PHB2Q99623 299 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 SPIN2AQ99865 258 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 SPIN2BQ9BPZ2 258 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 TM2D1Q9BX74 207 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 SELENOIQ9C0D9 397 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 K7EMT4 169 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 M0R1X1 148 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 B3GALNT1O75752 331 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CA1P00915 261 aaPredicted RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 CD2P06729 351 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 ZBTB25P24278 435 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CEACAM6P40199 344 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 SNRPGP62308 76 aaKnown RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 HLA-DRB3P79483 266 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 QRFPP83859 136 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 LRP2P98164 4655 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CDK10Q15131 360 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 VMA21Q3ZAQ7 101 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CCDC58Q4VC31 144 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 LAMTOR1Q6IAA8 161 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 C6orf201Q7Z4U5 140 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 SPATA12Q7Z6I5 190 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 LHFPL3Q86UP9 236 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 PUSL1Q8N0Z8 303 aaKnown RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 TRUB1Q8WWH5 349 aaKnown RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 EEF1AKMT3Q96AZ1 226 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 TMEM80Q96HE8 168 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 S100A13Q99584 98 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 CIB1Q99828 191 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 FAAP24Q9BTP7 215 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 C6orf62Q9GZU0 229 aaPredicted RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 DAZ1Q9NQZ3 744 aaKnown RBP3.27□□□□□ -1.89
COPS3-204ENST00000462236 ABRACLQ9P1F3 81 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 S4R3C0 116 aa3.27□□□□□ -1.89
COPS3-204ENST00000462236 NDUFA4O00483 81 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 TGOLN2O43493 480 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 MRPS14O60783 128 aaKnown RBP3.26□□□□□ -1.89
COPS3-204ENST00000462236 SCGB2A1O75556 95 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 DIRAS3O95661 229 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 CRYZL1O95825 349 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 IFNA10P01566 189 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 LIMS3P0CW19 117 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 LIMS4P0CW20 117 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 HIST1H1BP16401 226 aaKnown RBP3.26□□□□□ -1.89
COPS3-204ENST00000462236 PTBP1P26599 531 aaKnown RBP eCLIP3.26□□□□□ -1.89
COPS3-204ENST00000462236 HTR2CP28335 458 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 PPP3R1P63098 170 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 UNC119Q13432 240 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 TMEM41BQ5BJD5 291 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 Q5VSD8 79 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 RPL22L1Q6P5R6 122 aaKnown RBP3.26□□□□□ -1.89
COPS3-204ENST00000462236 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 OR13F1Q8NGS4 319 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 ZNRF2Q8NHG8 242 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 RNF2Q99496 336 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 UQCC2Q9BRT2 126 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 HDHD3Q9BSH5 251 aaPredicted RBP3.26□□□□□ -1.89
COPS3-204ENST00000462236 RDH8Q9NYR8 311 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 Q9UF83 564 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 SMPXQ9UHP9 88 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
COPS3-204ENST00000462236 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 TRBV6-7A0A0A0MS04 114 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 TRAV2A0A0B4J234 112 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms