RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 DYNAPQ8N1N2 210 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 TVP23CQ96ET8 276 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 TRGV9Q99603 122 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 RARRES2Q99969 163 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 TXNDC17Q9BRA2 123 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 PRSS22Q9GZN4 317 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 SMCO4Q9NRQ5 59 aa3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 SONP18583 2426 aaKnown RBP3.28□□□□□ -1.88
ATP13A3-206ENST00000461660 WDFY3Q8IZQ1 3526 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ASPMQ8IZT6 3477 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 NPIPB5A8MRT5 1133 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 BMPR1BO00238 502 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PDE6DO43924 150 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 IGHV3-23P01764 117 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 OR10J4P0C629 311 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PAX1P15863 534 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CTRB1P17538 263 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CCL20P78556 96 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PAX2Q02962 417 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 LDLRAD2Q5SZI1 272 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 Q8N9W7 124 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 NECAP1Q8NC96 275 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 FAM110DQ8TAY7 271 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 BLNKQ8WV28 456 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 TMPRSS5Q9H3S3 457 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 LINC00527Q9UJ94 153 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PRRC2AP48634 2157 aaKnown RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CHD6Q8TD26 2715 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 MDFIC2A0A1B0GVS7 189 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 E7EUB6 86 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 K7EQM0 130 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CRYGBP07316 175 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CSN1S1P47710 185 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CNN1P51911 297 aaKnown RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 UBE2G1P62253 170 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 HABP2Q14520 560 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 TMEM241Q24JQ0 296 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 DEFB112Q30KQ8 113 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 C15orf32Q32M92 178 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CENPVQ7Z7K6 275 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ZNF114Q8NC26 417 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 GRAMD2BQ96HH9 432 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 FNDC4Q9H6D8 234 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 LSM4Q9Y4Z0 139 aaKnown RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CENPEQ02224 2701 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 HIVEP2P31629 2446 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PLXNB1O43157 2135 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ITPR1Q14643 2758 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 FLNCQ14315 2725 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 IGHV7-81A0A0B4J1V7 117 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 IGHV3-35A0A0C4DH35 117 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 A0A0G2JLM5 398 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ZNF320A2RRD8 509 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ZNF785A8K8V0 405 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 SEC14L6B5MCN3 397 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 TEX22C9J3V5 150 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 TMEM250H0YL14 139 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 H7BYZ3 331 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 STAG3L2P0CL84 134 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 STAG3L3P0CL85 134 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 IGHV4-31P0DP07 118 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ATF4P18848 351 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 RPL11P62913 178 aaKnown RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ZNF90Q03938 601 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 RELQ04864 619 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 PNRC1Q12796 327 aaPredicted RBP3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 EBI3Q14213 229 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 GUCA2BQ16661 112 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 SPSB3Q6PJ21 355 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 BPIFA4PQ86YQ2 179 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 CLRN3Q8NCR9 226 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 TMEM170AQ8WVE7 144 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 MBD6Q96DN6 1003 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 OR51M1Q9H341 326 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 AAMDCQ9H7C9 122 aa3.27□□□□□ -1.89
ATP13A3-206ENST00000461660 ZZEF1O43149 2961 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 KALRNO60229 2985 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 OR2T8A6NH00 312 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 G3V318 75 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 H3BQ15 152 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 M0QZ24 198 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 IGHV4-59P01825 116 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 CD5P06127 495 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 SRP19P09132 144 aaKnown RBP3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 PSG1P11464 419 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 FCGR2BP31994 310 aaPredicted RBP3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 BMI1P35226 326 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 SUMO1P63165 101 aaKnown RBP3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 SRSF3P84103 164 aaKnown RBP3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 ICAM4Q14773 271 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 AWAT1Q58HT5 328 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 TMEM88Q6PEY1 159 aa3.26□□□□□ -1.89
ATP13A3-206ENST00000461660 CLEC19AQ6UXS0 136 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms