RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ARID1AO14497 2285 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 DNAH14Q0VDD8 3507 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 TET2Q6N021 2002 aaPredicted RBP1.9□□□□□ -2.11
HPS3-203ENST00000460822 TRAV27A0A087WT01 109 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 RIIAD1A6NNX1 92 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 C9JQL5 133 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 ZNF207O43670 478 aaKnown RBP1.9□□□□□ -2.11
HPS3-203ENST00000460822 IFNGP01579 166 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 IGKV1-39P01597 117 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 IGKV1D-39P04432 117 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CD5P06127 495 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CD2P06729 351 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 FREM3P0C091 2139 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 AKR1C3P42330 323 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 LPAR6P43657 344 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 RBP2P50120 134 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 RAB5CP51148 216 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CMC4P56277 68 aaPredicted RBP1.9□□□□□ -2.11
HPS3-203ENST00000460822 MP68P56378 58 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 SPCS3P61009 180 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 SSBP1Q04837 148 aaKnown RBP1.9□□□□□ -2.11
HPS3-203ENST00000460822 SKP2Q13309 424 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 TMEM241Q24JQ0 296 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 FAM222AQ5U5X8 452 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR10K2Q6IF99 312 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 C22orf39Q6P5X5 142 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 Q6ZR03 302 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 FA2HQ7L5A8 372 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 TMED4Q7Z7H5 227 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 ANGPTL5Q86XS5 388 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR13C8Q8NGS7 320 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR5H2Q8NGV7 314 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR2T27Q8NH04 317 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR8S1Q8NH09 359 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 FGF13Q92913 245 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 SLC25A21Q9BQT8 299 aaPredicted RBP1.9□□□□□ -2.11
HPS3-203ENST00000460822 AICDAQ9GZX7 198 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 OR51B6Q9H340 312 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 TUBA4BQ9H853 241 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CYTL1Q9NRR1 136 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 ZNF355PQ9NSJ1 428 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CALML5Q9NZT1 146 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CACFD1Q9UGQ2 172 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 DKKL1Q9UK85 242 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CELA1Q9UNI1 258 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 CPAMD8Q8IZJ3 1885 aa1.9□□□□□ -2.11
HPS3-203ENST00000460822 ATG2AQ2TAZ0 1938 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 PDE4DIPQ5VU43 2346 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 ALPK2Q86TB3 2170 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 IGLV4-69A0A075B6H9 119 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 TRBV6-7A0A0A0MS04 114 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 IGKV1-6A0A0C4DH72 117 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 A0A1W2PNU3 283 aaPredicted RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 C7orf77A4D0Y5 90 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 C4orf51C9J302 202 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 IFNA10P01566 189 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 HLA-DQA1P01909 254 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 MAS1P04201 325 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 CRHP06850 196 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 SEC11BP0C7V7 166 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H1BP16401 226 aaKnown RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 HMGA1P17096 107 aaKnown RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 SSR2P43308 183 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 SULT1A1P50225 295 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 SULT1A2P50226 295 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 HMGN3Q15651 99 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 MESTQ5EB52 335 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 SPIN3Q5JUX0 258 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 TMPPEQ6ZT21 453 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 VN1R4Q7Z5H5 301 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 LYG2Q86SG7 212 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 ORMDL3Q8N138 153 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 ZDHHC22Q8N966 263 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 TMEM229BQ8NBD8 167 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 OR4E2Q8NGC2 313 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 OR51D1Q8NGF3 324 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 OR4C6Q8NH72 309 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 RNASE11Q8TAA1 199 aaKnown RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 CIRBP-AS1Q8TBR5 109 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 C2orf15Q8WU43 125 aaKnown RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 ASB17Q8WXJ9 295 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 Q96M85 177 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 IP6K3Q96PC2 410 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 AIF1LQ9BQI0 150 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 C2orf88Q9BSF0 95 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 NDFIP1Q9BT67 221 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 CHCHD7Q9BUK0 85 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 CST11Q9H112 138 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 TAC3Q9UHF0 121 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 C14orf166Q9Y224 244 aaKnown RBP1.89□□□□□ -2.11
HPS3-203ENST00000460822 POLR1DQ9Y2S0 133 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 CENPVL3A0A0U1RRI6 287 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 EEF1E1-BLOC1S5C9J1V9 151 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 TMEM250H0YL14 139 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 RPL36A-HNRNPH2H7BZ11 118 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 ISLRO14498 428 aa1.89□□□□□ -2.11
HPS3-203ENST00000460822 RBFOX2O43251 390 aaKnown RBP eCLIP1.89□□□□□ -2.11
HPS3-203ENST00000460822 MED6O75586 246 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms