RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 RTN4RQ9BZR6 473 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 AICDAQ9GZX7 198 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 Q9UFV3 132 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 KMT2EQ8IZD2 1858 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGLV3-32A0A0A0MS00 114 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGHV1-69DA0A0B4J2H0 117 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CLPSL1A2RUU4 121 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNHIT1O43257 154 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CD5LO43866 347 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGHV1-69P01742 117 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SUMO2P61956 95 aaKnown RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MST1LQ2TV78 715 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IBA57Q5T440 356 aaKnown RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ASPHD2Q6ICH7 369 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SLC25A34Q6PIV7 304 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TCF23Q7RTU1 214 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR51G1Q8NGK1 321 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RCHY1Q96PM5 261 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 H3BUX3 64 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NPIPB7O75200 414 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGFBP3P17936 291 aaPredicted RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PQLC2Q6ZP29 291 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR5AN1Q8NGI8 311 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RNASEH2CQ8TDP1 164 aaKnown RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LGALS3P17931 250 aaKnown RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CNTFRP26992 372 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 UBE2E1P51965 193 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SLC25A47Q6Q0C1 308 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMEM170AQ8WVE7 144 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CTHRC1Q96CG8 243 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ARL14EPLP0DKL9 152 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 UCP1P25874 307 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 REG1BP48304 166 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FOXL2P58012 376 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HSPE1P61604 102 aaKnown RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RPL36AP83881 106 aaKnown RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PAX8Q06710 450 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SNAI3Q3KNW1 292 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RPL36ALQ969Q0 106 aaKnown RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SPATA25Q9BR10 227 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MEGF9Q9H1U4 602 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 DIDO1Q9BTC0 2240 aaKnown RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 DNAL4O96015 105 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HLA-DQA1P01909 254 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MIC13Q5XKP0 118 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FAM71F2Q6NXP2 309 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF256Q9Y2P7 627 aaPredicted RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LOC389332A0A1B0GUA5 103 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 A8MWL6 223 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LYPD3O95274 346 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR2H2O95918 312 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FABP2P12104 132 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LINC00114Q6XXX2 140 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CYP2G1PQ6ZSU1 146 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FGFRL1Q8N441 504 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LEPROTL1O95214 131 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGHV1-2P23083 117 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FCGR2BP31994 310 aaPredicted RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RPL23P62829 140 aaKnown RBP5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 Q6AWC8 147 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CSTL1Q9H114 145 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ATG2AQ2TAZ0 1938 aa5.19□□□□□ -1.58
HLA-DQA1-205ENST00000460633 KBTBD11-OT1A0A1B0GTJ5 212 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SLC17A3O00476 420 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CKS1BP61024 79 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 EFNB3Q15768 340 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PSMG3Q9BT73 122 aaPredicted RBP5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PEF1Q9UBV8 284 aaKnown RBP5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZFP30Q9Y2G7 519 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LAMTOR2Q9Y2Q5 125 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CLDN16Q9Y5I7 305 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 VENTXO95231 258 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TDGF1P3P51864 188 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C5orf64Q2M2E5 130 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ODF3L1Q8IXM7 274 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MAP1LC3AQ9H492 121 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGKV1D-43A0A0B4J1Z2 117 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RBFOX2O43251 390 aaKnown RBP eCLIP5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SERF1AO75920 110 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGKV3-11P04433 115 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ADMP35318 185 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TCF24Q7RTU0 167 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NFE4Q86UQ8 179 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NIT1Q86X76 327 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF664Q8N3J9 261 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ATP6V0BQ99437 205 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 REG1AP05451 166 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 UMODP07911 640 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HILS1P60008 231 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SS18Q15532 418 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CLEC19AQ6UXS0 136 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ASCL2Q99929 193 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 COX11Q9Y6N1 276 aa5.18□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TRBV9A0A0B4J1U6 114 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 GGTLC3B5MD39 225 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MPZP25189 248 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CRYBB3P26998 211 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms