RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LGALS3P17931 250 aaKnown RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 CA7P43166 264 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 MRPS10P82664 201 aaKnown RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 CAV1Q03135 178 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 PDGFRLQ15198 375 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 NOXRED1Q6NXP6 359 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 SNX29P2Q8IUI4 249 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 MSRB3Q8IXL7 192 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 OR4E2Q8NGC2 313 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 ZNF418Q8TF45 676 aaPredicted RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 MS4A6EQ96DS6 147 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 GPX7Q96SL4 187 aaPredicted RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 PRADC1Q9BSG0 188 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 WDR61Q9GZS3 305 aaKnown RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 CST9LQ9H4G1 147 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 MRPL16Q9NX20 251 aaKnown RBP2.61□□□□□ -1.99
CCDC50-203ENST00000460064 OR5AC2Q9NZP5 309 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 TP73-AS1Q9UF72 201 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 NALCNQ8IZF0 1738 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 SDK2Q58EX2 2172 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 REREQ9P2R6 1566 aa2.61□□□□□ -1.99
CCDC50-203ENST00000460064 DOCK5Q9H7D0 1870 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 TRBV20OR9-2A0A075B6H5 130 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 IGKV1D-43A0A0B4J1Z2 117 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 LY6LH3BQJ8 138 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 J3QRK9 145 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 FGF7P21781 194 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 OPRM1P35372 400 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 INSL3P51460 131 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 PPP3R1P63098 170 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 LYRM7Q5U5X0 104 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 SCXQ7RTU7 201 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 OR52R1Q8NGF1 315 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 RAB2BQ8WUD1 216 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 OR8B2Q96RD0 313 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 RTL8AQ9BWD3 113 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 OR2J1Q9GZK6 312 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 AICDAQ9GZX7 198 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 OTORQ9NRC9 128 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 LAMTOR3Q9UHA4 124 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 DNAJC12Q9UKB3 198 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 ZFP30Q9Y2G7 519 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 MRPS16Q9Y3D3 137 aaKnown RBP2.6□□□□□ -1.99
CCDC50-203ENST00000460064 RB1CC1Q8TDY2 1594 aa2.6□□□□□ -1.99
CCDC50-203ENST00000460064 ZNF609O15014 1411 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 DOCK6Q96HP0 2047 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 NEO1Q92859 1461 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 KIF13BQ9NQT8 1826 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 ZNF106Q9H2Y7 1883 aaKnown RBP2.59□□□□□ -1.99
CCDC50-203ENST00000460064 A0A1W2PNM2 257 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 GABARAPH6UMI1 98 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 CCL25O15444 150 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 MT-ND4LP03901 98 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 CTSGP08311 255 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 P0DMU3 169 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 FAM231AP0DMU4 169 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 FAM231CP0DMU5 169 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 PKIAP61925 76 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 HBA1P69905 142 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 GLT8D1Q68CQ7 371 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 TEX261Q6UWH6 196 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 GPHB5Q86YW7 130 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 PRR15Q8IV56 129 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 PACRGLQ8N7B6 248 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 MRPL30Q8TCC3 161 aaKnown RBP2.59□□□□□ -1.99
CCDC50-203ENST00000460064 DCANP1Q8TF63 244 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 TOMM6Q96B49 74 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 BORCS8Q96FH0 119 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 TEX37Q96LM6 180 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 SLC25A21Q9BQT8 299 aaPredicted RBP2.59□□□□□ -1.99
CCDC50-203ENST00000460064 NKX6-2Q9C056 277 aaPredicted RBP2.59□□□□□ -1.99
CCDC50-203ENST00000460064 IMUPQ9GZP8 106 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 SCN3BQ9NY72 215 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 NAT8Q9UHE5 227 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 AK3Q9UIJ7 227 aa2.59□□□□□ -1.99
CCDC50-203ENST00000460064 NOTCH2Q04721 2471 aa2.59□□□□□ -2
CCDC50-203ENST00000460064 EIF4G3O43432 1585 aaKnown RBP2.58□□□□□ -2
CCDC50-203ENST00000460064 CC2D2AQ9P2K1 1620 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 TRAV9-1A0A075B6T8 112 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 TRAV38-1A0A0B4J264 116 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 SPAARA0A1B0GVQ0 90 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 DPRXA6NFQ7 191 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 A8MWP6 167 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 DPM2O94777 84 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 UCHL1P09936 223 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 IGLC6P0CF74 106 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 ZNF80P51504 273 aaPredicted RBP2.58□□□□□ -2
CCDC50-203ENST00000460064 COPZ1P61923 177 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 BSPH1Q075Z2 132 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 EIF3IQ13347 325 aaKnown RBP2.58□□□□□ -2
CCDC50-203ENST00000460064 RTL8BQ17RB0 113 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 NCMAPQ5T1S8 102 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 TMEM244Q5VVB8 128 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 GLIPR1L1Q6UWM5 242 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 TMEM14EPQ6UXP3 125 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 TCTEX1D1Q8N7M0 179 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 OR5C1Q8NGR4 320 aa2.58□□□□□ -2
CCDC50-203ENST00000460064 RNASE6Q93091 150 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms