RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ZNF474Q6S9Z5 364 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 KLHDC1Q8N7A1 406 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 OR4C13Q8NGP0 309 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 OR10X1Q8NGY0 326 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 BBC3Q96PG8 261 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 VKORC1Q9BQB6 163 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF430Q9H8G1 570 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF331Q9NQX6 463 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 CBLN4Q9NTU7 201 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 C1RLQ9NZP8 487 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 NAT8BQ9UHF3 227 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF835Q9Y2P0 537 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 KLF12Q9Y4X4 402 aa4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 UBR5O95071 2799 aaPredicted RBP4.97□□□□□ -1.61
UBQLN4-202ENST00000459954 SVILO95425 2214 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TRBV6-1A0A0K0K1D8 114 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 A0A1W2PS18 150 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 SRRM4A7MD48 611 aaKnown RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 VSTM5A8MXK1 200 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 DIRC3C9JPN6 131 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 H0YJW9 148 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 CORTO00230 105 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 BMPR1BO00238 502 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TNFRSF13BO14836 293 aaPredicted RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 SPRY3O43610 288 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 APCSP02743 223 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 CRYGCP07315 174 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 HIST1H1EP10412 219 aaKnown RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 HOXA4Q00056 320 aaPredicted RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 OR5I1Q13606 314 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 COTL1Q14019 142 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 C10orf113Q5VZT2 155 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 GFRALQ6UXV0 394 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 ZNF705AQ6ZN79 300 aaPredicted RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 ZCCHC24Q8N2G6 241 aaKnown RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 Q8N976 141 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TEX45Q8NA69 505 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TNFRSF14Q92956 283 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 ST6GALNAC6Q969X2 333 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 FLYWCH2Q96CP2 140 aaKnown RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 HARBI1Q96MB7 349 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TMEM68Q96MH6 324 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TRGV9Q99603 122 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 PAXXQ9BUH6 204 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 SLC25A2Q9BXI2 301 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 NRN1Q9NPD7 142 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 ZNF492Q9P255 531 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 KAAG1Q9UBP8 84 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 UQCR10Q9UDW1 63 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 TBL2Q9Y4P3 447 aaKnown RBP4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 FAM215AQ9Y5M1 114 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 ICE1Q9Y2F5 2266 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 MALRD1Q5VYJ5 2156 aa4.96□□□□□ -1.62
UBQLN4-202ENST00000459954 FLNCQ14315 2725 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 A0A1B0GUS0 222 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 PEX7O00628 323 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 DLEU1O43261 78 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 COX7A2P2O60397 106 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 ACTL6BO94805 426 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 FSTL3O95633 263 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 IGKV1-16P04430 117 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 PLA2G2AP14555 144 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 PMCHP20382 165 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 CD40P25942 277 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 REG1BP48304 166 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 AMTP48728 403 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 UBE2L3P68036 154 aaKnown RBP4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 VMA21Q3ZAQ7 101 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 SPRNQ5BIV9 151 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 COL5A1-AS1Q5SY13 56 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 TMEM108Q6UXF1 575 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 ZNF329Q86UD4 541 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 ZGRF1Q86YA3 2104 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 DOLPP1Q86YN1 238 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 OR9G1Q8NH87 305 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 FAM57AQ8TBR7 257 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 VN1R17PQ8TDU5 208 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 TSKUQ8WUA8 353 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 LEAP2Q969E1 77 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 PERPQ96FX8 193 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 PLPPR2Q96GM1 343 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 FMC1Q96HJ9 113 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 CCL13Q99616 98 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 HINT2Q9BX68 163 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 RNASE7Q9H1E1 156 aaKnown RBP4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 C7orf69Q9H7B7 122 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 SAP30LQ9HAJ7 183 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 FBXL7Q9UJT9 491 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 WASHC3Q9Y3C0 194 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 MRPS16Q9Y3D3 137 aaKnown RBP4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 LRRK2Q5S007 2527 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 ARFGEF3Q5TH69 2177 aa4.95□□□□□ -1.62
UBQLN4-202ENST00000459954 COL12A1Q99715 3063 aa4.94□□□□□ -1.62
UBQLN4-202ENST00000459954 IGKV1D-37A0A075B6S9 117 aa4.94□□□□□ -1.62
UBQLN4-202ENST00000459954 A0A1B0GXF2 115 aa4.94□□□□□ -1.62
UBQLN4-202ENST00000459954 DPRXA6NFQ7 191 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms