RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ZNF207O43670 478 aaKnown RBP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 PRAF2O60831 178 aa16.43■□□□□ 0.22
SSNA1-202ENST00000459860 BMI1P35226 326 aa16.43■□□□□ 0.22
SSNA1-202ENST00000459860 GPX4P36969 197 aaPredicted RBP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 POLR2GP62487 172 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 RBPMS2Q6ZRY4 209 aaKnown RBP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 OR10C1Q96KK4 312 aa16.43■□□□□ 0.22
SSNA1-202ENST00000459860 STRAPQ9Y3F4 350 aaKnown RBP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 PUS1Q9Y606 427 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSNA1-202ENST00000459860 C5orf51A6NDU8 294 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 CCSO14618 274 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 SSSCA1O60232 199 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 OR10J1P30954 320 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 SPANXN5Q5MJ07 72 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 TOMM20LQ6UXN7 152 aa16.42■□□□□ 0.22
SSNA1-202ENST00000459860 TRAV14DV4A0A0A6YYC5 116 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 TRAV25A0A0B4J276 109 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 INMT-MINDY4F8WBC2 141 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 H3BP45 60 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 TIGITQ495A1 244 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 LAMTOR1Q6IAA8 161 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 TMEM61Q8N0U2 210 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 NPIPB3Q92617 1050 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 WDR89Q96FK6 387 aaPredicted RBP16.41■□□□□ 0.22
SSNA1-202ENST00000459860 PSENENQ9NZ42 101 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 SELENOKQ9Y6D0 94 aa16.41■□□□□ 0.22
SSNA1-202ENST00000459860 IGHV7-4-1A0A0J9YVY3 117 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 IGLC1P0CG04 106 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 GSG1LQ6UXU4 331 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 Q8WTZ3 238 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 RAB40CQ96S21 281 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 B9D2Q9BPU9 175 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 SMPXQ9UHP9 88 aa16.4■□□□□ 0.22
SSNA1-202ENST00000459860 SCAF4O95104 1147 aaKnown RBP16.39■□□□□ 0.21
SSNA1-202ENST00000459860 IGKV1-17P01599 117 aa16.39■□□□□ 0.21
SSNA1-202ENST00000459860 CD81P60033 236 aa16.39■□□□□ 0.21
SSNA1-202ENST00000459860 ZFAND3Q9H8U3 227 aa16.39■□□□□ 0.21
SSNA1-202ENST00000459860 ZFP92A6NM28 416 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 SNRPGP15A8MWD9 76 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 YPEL3P61236 119 aaPredicted RBP16.38■□□□□ 0.21
SSNA1-202ENST00000459860 NARS2Q96I59 477 aaKnown RBP16.38■□□□□ 0.21
SSNA1-202ENST00000459860 ZNF414Q96IQ9 312 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 SMIM8Q96KF7 97 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 C2orf50Q96LR7 162 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 METTL26Q96S19 204 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 MARVELD1Q9BSK0 173 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 RHPN1-AS1Q9BWJ2 59 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 TMEM231Q9H6L2 316 aa16.38■□□□□ 0.21
SSNA1-202ENST00000459860 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 L7N2F9 121 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 FABP1P07148 127 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 VAMP2P63027 116 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 GAMTQ14353 236 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 NEURL2Q9BR09 285 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 TENM3Q9P273 2699 aa16.37■□□□□ 0.21
SSNA1-202ENST00000459860 IGHV3-49A0A0A0MS15 119 aa16.36■□□□□ 0.21
SSNA1-202ENST00000459860 CHEK1O14757 476 aa16.36■□□□□ 0.21
SSNA1-202ENST00000459860 MBPP02686 304 aaPredicted RBP16.36■□□□□ 0.21
SSNA1-202ENST00000459860 NPPCP23582 126 aa16.36■□□□□ 0.21
SSNA1-202ENST00000459860 TAS2R30P59541 319 aa16.36■□□□□ 0.21
SSNA1-202ENST00000459860 Q8N1Y9 231 aa16.36■□□□□ 0.21
SSNA1-202ENST00000459860 SPAG8Q99932 426 aaPredicted RBP16.36■□□□□ 0.21
SSNA1-202ENST00000459860 RCL1Q9Y2P8 373 aaKnown RBP16.36■□□□□ 0.21
SSNA1-202ENST00000459860 LSM5Q9Y4Y9 91 aaKnown RBP16.36■□□□□ 0.21
SSNA1-202ENST00000459860 A0A1W2PS18 150 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 TSPAN4O14817 238 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 TSC22D2O75157 780 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 TOMM40O96008 361 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 CD5P06127 495 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 RD3LP0DJH9 198 aa16.35■□□□□ 0.21
SSNA1-202ENST00000459860 IGHV3OR16-13A0A075B7E8 117 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 IGHV3-74A0A0B4J1X5 117 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 PTTG1O95997 202 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 IL4P05112 153 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 IGHV4-30-4P0DP06 118 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 PVALBP20472 110 aaPredicted RBP16.34■□□□□ 0.21
SSNA1-202ENST00000459860 AKR1C1Q04828 323 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 OR8G2PQ6IF36 304 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 RNF2Q99496 336 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 TUBA4BQ9H853 241 aa16.34■□□□□ 0.21
SSNA1-202ENST00000459860 OR4C46A6NHA9 309 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 GOSR2O14653 212 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 FRMD6-AS1P0C7T7 363 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 S100A10P60903 97 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 ACOT7LQ6ZUV0 252 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 GRAMD2BQ96HH9 432 aa16.33■□□□□ 0.2
SSNA1-202ENST00000459860 SMCO3A2RU48 225 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 PRSS46E5RG02 174 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 K7EPK0 472 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 SSNA1O43805 119 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 CD7P09564 240 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 METTL15P1P0C7V9 234 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 PAX9P55771 341 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 TMEM14EPQ6UXP3 125 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 OR51G1Q8NGK1 321 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 ST8SIA2Q92186 375 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 VSIRQ9H7M9 311 aa16.32■□□□□ 0.2
SSNA1-202ENST00000459860 C7orf66A4D0T2 115 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 A8MZ25 164 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 HNRNPCP07910 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms