RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 OR4D5Q8NGN0 318 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 COQ8AQ8NI60 647 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 MITD1Q8WV92 249 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 RNF2Q99496 336 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 BATF3Q9NR55 127 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 NUDT15Q9NV35 164 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 U3KQ87 197 aa8.46□□□□□ -1.06
HDAC9-217ENST00000455069 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 TRAV25A0A0B4J276 109 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 TSPAN4O14817 238 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 SYNGR2O43760 224 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 SLC25A4P12235 298 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 ZNF846Q147U1 533 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 FAM90A2PQ658T7 463 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 LINC00322Q6ZN03 302 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-217ENST00000455069 LILRB2Q8N423 598 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 DEFB125Q8N687 156 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 ST8SIA2Q92186 375 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 WWC2-AS2Q96NR7 200 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 SEC22CQ9BRL7 303 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 RHPN1-AS1Q9BWJ2 59 aa8.45□□□□□ -1.06
HDAC9-217ENST00000455069 WDR12Q9GZL7 423 aaKnown RBP8.45□□□□□ -1.06
HDAC9-217ENST00000455069 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 OR11H12B2RN74 326 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 WRBO00258 174 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 CCSO14618 274 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 OR10J1P30954 320 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 ID3Q02535 119 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 RBPMS2Q6ZRY4 209 aaKnown RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 NOXA1Q86UR1 476 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 ACY3Q96HD9 319 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 SPAG8Q99932 426 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-217ENST00000455069 TM2D3Q9BRN9 247 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 VSIRQ9H7M9 311 aa8.44□□□□□ -1.06
HDAC9-217ENST00000455069 IGKV1D-37A0A075B6S9 117 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 TRAV30A0A087WSZ9 112 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 IGHV3-66A0A0C4DH42 116 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 H3BP45 60 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 MED6O75586 246 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 IFNA4P05014 189 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 POLR2GP62487 172 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC9-217ENST00000455069 GAMTQ14353 236 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 ODF3L2Q3SX64 289 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 ETFRF1Q6IPR1 90 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 OR1S2Q8NGQ3 325 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 ZNF431Q8TF32 576 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-217ENST00000455069 GINS3Q9BRX5 216 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 U3KQK5 164 aa8.43□□□□□ -1.06
HDAC9-217ENST00000455069 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 FAM240BA0A1B0GVZ2 78 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 IFNA21P01568 189 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 CRYBB3P26998 211 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 NKX2-1P43699 371 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 PAX9P55771 341 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 ATP5IP56385 69 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 YPEL3P61236 119 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 USF2Q15853 346 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 HAGHQ16775 308 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 CIB3Q96Q77 187 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 UBQLN2Q9UHD9 624 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 RCL1Q9Y2P8 373 aaKnown RBP8.42□□□□□ -1.06
HDAC9-217ENST00000455069 U3KQE9 123 aa8.42□□□□□ -1.06
HDAC9-217ENST00000455069 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 SSSCA1O60232 199 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 CCNKO75909 580 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 TOMM40O96008 361 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 GPX4P36969 197 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-217ENST00000455069 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 LAMTOR1Q6IAA8 161 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 MZT2BQ6NZ67 158 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 TCF24Q7RTU0 167 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 RCHY1Q96PM5 261 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
HDAC9-217ENST00000455069 AGRNO00468 2067 aa8.41□□□□□ -1.06
HDAC9-217ENST00000455069 IGKV3-7A0A075B6H7 116 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 SCGB2A1O75556 95 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 DFFBO76075 338 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 SCGB1D2O95969 90 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 MBPP02686 304 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-217ENST00000455069 IL4P05112 153 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 PSG1P11464 419 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 NPPCP23582 126 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 RAB11AP62491 216 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 ZNF90Q03938 601 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 GBGT1Q8N5D6 347 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 C12orf45Q8N5I9 185 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms