RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 MYCBP2O75592 4640 aa15.33■□□□□ 0.04
TNFRSF25-208ENST00000453341 INS-IGF2F8WCM5 200 aa15.32■□□□□ 0.04
TNFRSF25-208ENST00000453341 ZNRF2Q8NHG8 242 aa15.32■□□□□ 0.04
TNFRSF25-208ENST00000453341 VCX3AQ9NNX9 186 aa15.32■□□□□ 0.04
TNFRSF25-208ENST00000453341 DIABLOQ9NR28 239 aa15.32■□□□□ 0.04
TNFRSF25-208ENST00000453341 IGKV3-20P01619 116 aa15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 HNRNPCP07910 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 RPS19P39019 145 aaKnown RBP15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 OPRK1P41145 380 aa15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 AP2S1P53680 142 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 OR5H2Q8NGV7 314 aa15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 SEPSECSQ9HD40 501 aaKnown RBP15.31■□□□□ 0.04
TNFRSF25-208ENST00000453341 CORTO00230 105 aa15.3■□□□□ 0.04
TNFRSF25-208ENST00000453341 SLC35G3Q8N808 338 aa15.3■□□□□ 0.04
TNFRSF25-208ENST00000453341 ZNF709Q8N972 641 aa15.3■□□□□ 0.04
TNFRSF25-208ENST00000453341 NRN1Q9NPD7 142 aa15.3■□□□□ 0.04
TNFRSF25-208ENST00000453341 YTHDF2Q9Y5A9 579 aaKnown RBP15.3■□□□□ 0.04
TNFRSF25-208ENST00000453341 A0A0B4J293 547 aa15.29■□□□□ 0.04
TNFRSF25-208ENST00000453341 NAT1P18440 290 aa15.29■□□□□ 0.04
TNFRSF25-208ENST00000453341 C15orf53Q8NAA6 179 aa15.29■□□□□ 0.04
TNFRSF25-208ENST00000453341 OR6F1Q8NGZ6 308 aa15.29■□□□□ 0.04
TNFRSF25-208ENST00000453341 ATG101Q9BSB4 218 aa15.29■□□□□ 0.04
TNFRSF25-208ENST00000453341 IGKV1-5P01602 117 aa15.28■□□□□ 0.04
TNFRSF25-208ENST00000453341 P0C879 139 aa15.28■□□□□ 0.04
TNFRSF25-208ENST00000453341 NKX2-1P43699 371 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF25-208ENST00000453341 TAS2R46P59540 309 aa15.28■□□□□ 0.04
TNFRSF25-208ENST00000453341 USF2Q15853 346 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF25-208ENST00000453341 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 SRRM2Q9UQ35 2752 aaKnown RBP15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 LOC102723971A0A1B0GUV8 181 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 SCGB2A1O75556 95 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 IGLC1P0CG04 106 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 HRH1P35367 487 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 RPL5P46777 297 aaKnown RBP15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 SUB1P53999 127 aaKnown RBP eCLIP15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 DAD1P61803 113 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 LYSMD2Q8IV50 215 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 C1orf158Q8N1D5 194 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 FUNDC2Q9BWH2 189 aa15.27■□□□□ 0.04
TNFRSF25-208ENST00000453341 ETV6P41212 452 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 KRTAP10-2P60368 255 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 NCS1P62166 190 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 BSXQ3C1V8 233 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 SIGLEC15Q6ZMC9 328 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 SLC35B3Q9H1N7 401 aa15.26■□□□□ 0.03
TNFRSF25-208ENST00000453341 TRAV30A0A087WSZ9 112 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 BUB3O43684 328 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 HLA-DMAP28067 261 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 S100GP29377 79 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 HOXA1P49639 335 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 DHODHQ02127 395 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 Q8WTZ3 238 aa15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 SAV1Q9H4B6 383 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF25-208ENST00000453341 HBE1P02100 147 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 SMIM18P0DKX4 95 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 TAS2R20P59543 309 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 VBP1P61758 197 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 LPCAT3Q6P1A2 487 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 GSG1LQ6UXU4 331 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 CROCCP3Q8IVE0 287 aa15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 FLG2Q5D862 2391 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF25-208ENST00000453341 EPM2AB3EWF7 344 aa15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 IL4P05112 153 aa15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 YPEL3P61236 119 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 PRSS54Q6PEW0 395 aa15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 OR1S2Q8NGQ3 325 aa15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 GOLT1BQ9Y3E0 138 aa15.23■□□□□ 0.03
TNFRSF25-208ENST00000453341 TMEM127O75204 238 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 OR10J1P30954 320 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 RND2P52198 227 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 UBE2NLQ5JXB2 153 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 FOXI2Q6ZQN5 318 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 SAMD12Q8N8I0 201 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 OR4B1Q8NGF8 309 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 S100A16Q96FQ6 103 aaKnown RBP15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 CLUHP3Q96NS8 147 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 WDR12Q9GZL7 423 aaKnown RBP15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 NAA50Q9GZZ1 169 aaKnown RBP15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 LINC00588Q9Y4M8 146 aa15.22■□□□□ 0.03
TNFRSF25-208ENST00000453341 TSPAN5P62079 268 aa15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 ZNF79Q15937 498 aa15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 RRN3P1Q2M238 152 aa15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 LINC00052Q96N35 136 aa15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 C7orf50Q9BRJ6 194 aaKnown RBP15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 PDCD10Q9BUL8 212 aa15.21■□□□□ 0.03
TNFRSF25-208ENST00000453341 RPS10-NUDT3A0A1W2PQS6 291 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 NUDT3O95989 172 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 INAFM2P0DMQ5 153 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 ALDH3B2P48448 385 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 AKR1C2P52895 323 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 UCP3P55916 312 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 TP53RKQ96S44 253 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 KRTAP1-5Q9BYS1 174 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 ENY2Q9NPA8 101 aa15.2■□□□□ 0.02
TNFRSF25-208ENST00000453341 A0A0G2JRQ6 117 aa15.19■□□□□ 0.02
TNFRSF25-208ENST00000453341 F6UB75 175 aa15.19■□□□□ 0.02
TNFRSF25-208ENST00000453341 NXPH3O95157 252 aa15.19■□□□□ 0.02
TNFRSF25-208ENST00000453341 PRM2P04554 102 aa15.19■□□□□ 0.02
TNFRSF25-208ENST00000453341 PSG9Q00887 426 aa15.19■□□□□ 0.02
TNFRSF25-208ENST00000453341 TMEM69Q5SWH9 247 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms