RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 HOXB5P09067 269 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 ANXA7P20073 488 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 ATP5IP56385 69 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 SPAG8Q99932 426 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 BATF3Q9NR55 127 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
PDLIM2-214ENST00000452226 TSPAN4O14817 238 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 SLC25A4P12235 298 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 PRSS54Q6PEW0 395 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 TOMM20LQ6UXN7 152 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 ZNF600Q6ZNG1 722 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
PDLIM2-214ENST00000452226 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 YIF1AO95070 293 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 IFNA10P01566 189 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 TCRBP04435 133 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 LAMTOR1Q6IAA8 161 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 COQ8AQ8NI60 647 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 ZFAND3Q9H8U3 227 aa13.67□□□□□ -0.22
PDLIM2-214ENST00000452226 ALMS1Q8TCU4 4167 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 TRAV30A0A087WSZ9 112 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 ADAP1O75689 374 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 PUS1Q9Y606 427 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDLIM2-214ENST00000452226 TRAV14DV4A0A0A6YYC5 116 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 CHEK1O14757 476 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 MED6O75586 246 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 IGLC1P0CG04 106 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 RND2P52198 227 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 APOC4P55056 127 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 MITD1Q8WV92 249 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 GINS3Q9BRX5 216 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 RHPN1-AS1Q9BWJ2 59 aa13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 WDR12Q9GZL7 423 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-214ENST00000452226 MPTX1A8MV57 137 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 SYNGR2O43760 224 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 ID3Q02535 119 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 ASAH1Q13510 395 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 ZNF846Q147U1 533 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 TIGITQ495A1 244 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 OR1S2Q8NGQ3 325 aa13.64□□□□□ -0.23
PDLIM2-214ENST00000452226 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 SCGB2A1O75556 95 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 IFNA21P01568 189 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 GPX4P36969 197 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 YPEL3P61236 119 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 Q6ZWC4 215 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 WFDC3Q8IUB2 231 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 OR4D5Q8NGN0 318 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 NPIPB3Q92617 1050 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 CIB3Q96Q77 187 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 RNF2Q99496 336 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 MAGT1Q9H0U3 335 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 NUDT15Q9NV35 164 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 TP53TG1Q9Y2A0 90 aa13.63□□□□□ -0.23
PDLIM2-214ENST00000452226 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 A0A0J9YWU9 116 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 SPRY2O43597 315 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 UPK1BO75841 260 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 IFNA4P05014 189 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 IAPPP10997 89 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 OR10J1P30954 320 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 BMI1P35226 326 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 DEFB135Q30KP9 77 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
PDLIM2-214ENST00000452226 IGHV3-49A0A0A0MS15 119 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 UBE2CO00762 179 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 APOHP02749 345 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 IFITM3Q01628 133 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 MZT2BQ6NZ67 158 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
PDLIM2-214ENST00000452226 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 WRBO00258 174 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 H2AFB2P0C5Z0 115 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 RPL35AP18077 110 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 CRYBB3P26998 211 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 RAB11AP62491 216 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 PMS2P11Q13670 270 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 GAMTQ14353 236 aa13.6□□□□□ -0.23
PDLIM2-214ENST00000452226 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms