RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 PI3P19957 117 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 UCP3P55916 312 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 DHODHQ02127 395 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 CROCCP3Q8IVE0 287 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 DKK2Q9UBU2 259 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 U3KQE9 123 aa12.83□□□□□ -0.36
CHCHD3-203ENST00000448878 TEX48A0A1B0GUV7 120 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 TMEM127O75204 238 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 IL4P05112 153 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 OR10J1P30954 320 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 TGFBR1P36897 503 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 RPL5P46777 297 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 RND2P52198 227 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 SIGLEC15Q6ZMC9 328 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 OR4B1Q8NGF8 309 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 OR1S2Q8NGQ3 325 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 RRNAD1Q96FB5 475 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
CHCHD3-203ENST00000448878 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 ZNF705FA8MVS1 300 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 ZNF705DP0CH99 300 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 ZNF705BP0CI00 300 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 PIGPP57054 158 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 DEFB1P60022 68 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 TNP2Q05952 138 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 NEDD8Q15843 81 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 TMEM88Q6PEY1 159 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
CHCHD3-203ENST00000448878 C3orf85A0A1B0GTC6 90 aa12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 M0QYG6 137 aa12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 IGLC1P0CG04 106 aa12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 USF2Q15853 346 aaPredicted RBP12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 SP6Q3SY56 376 aa12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 GPX8Q8TED1 209 aa12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
CHCHD3-203ENST00000448878 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 HBE1P02100 147 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 RCVRNP35243 200 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 HTR2BP41595 481 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 DAD1P61803 113 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
CHCHD3-203ENST00000448878 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 GSTZ1O43708 216 aaPredicted RBP12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 P0C879 139 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 SLC25A4P12235 298 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 RND3P61587 244 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 RNASE12Q5GAN4 147 aaKnown RBP12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 GSG1LQ6UXU4 331 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 ACY3Q96HD9 319 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
CHCHD3-203ENST00000448878 A0A0G2JRQ6 117 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 BUB3O43684 328 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 ID1P41134 155 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 SPCS3P61009 180 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 NPIPB3Q92617 1050 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 PBDC1Q9BVG4 233 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 YTHDF1Q9BYJ9 559 aaKnown RBP12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.37
CHCHD3-203ENST00000448878 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 RRN3P1Q2M238 152 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 BSXQ3C1V8 233 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 ETFRF1Q6IPR1 90 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 MAGT1Q9H0U3 335 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 SAV1Q9H4B6 383 aaPredicted RBP12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 Q9H521 79 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 SCPEP1Q9HB40 452 aa12.76□□□□□ -0.37
CHCHD3-203ENST00000448878 TOMM40O96008 361 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 OXA1LQ15070 435 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 C6orf223Q8N319 242 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 C15orf53Q8NAA6 179 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 KLK11Q9UBX7 282 aa12.75□□□□□ -0.37
CHCHD3-203ENST00000448878 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 NXPH3O95157 252 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 PSG1P11464 419 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms