RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	KIAA0141	Q14154	515 aa	Predicted RBP	14	□□□□□ -0.17
LMNA-208	ENST00000448611	MORN5	Q5VZ52	161 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	PQLC2	Q6ZP29	291 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	OR1L6	Q8NGR2	347 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	OR4X1	Q8NH49	305 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	PFDN5	Q99471	154 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	NAT8	Q9UHE5	227 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	NPIPB5	A8MRT5	1133 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611		K7EIM0	57 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	COX7A2P2	O60397	106 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	MSMB	P08118	114 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	C8orf88	P0DMB2	117 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	OR1L4	Q8NGR5	311 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	FAM167A-AS1	Q96KT0	104 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	DOK5	Q9P104	306 aa		14	□□□□□ -0.17
LMNA-208	ENST00000448611	IGHV7-81	A0A0B4J1V7	117 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611		F6UZH7	168 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	KRTAP10-9	P60411	292 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	TMEM241	Q24JQ0	296 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	C10orf113	Q5VZT2	155 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	TTC9C	Q8N5M4	171 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	SLC25A2	Q9BXI2	301 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	TMEM167B	Q9NRX6	74 aa		13.99	□□□□□ -0.17
LMNA-208	ENST00000448611	IGHV3OR16-10	A0A075B7F0	116 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	TRAV40	A0A0B4J280	105 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	LOC105371267	A0A1B0GV96	52 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	HLA-DRB1	P01911	266 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	IGLC1	P0CG04	106 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	EGR2	P11161	476 aa	Predicted RBP	13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	BPIFB3	P59826	476 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	CLEC12B	Q2HXU8	276 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	ARL2-SNX15	V9GYD0	113 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	SPG11	Q96JI7	2443 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	TRAV5	A0A0B4J249	113 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	OR7C2	O60412	319 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	OR2C1	O95371	312 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	SLC25A16	P16260	332 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	KLF17	Q5JT82	389 aa	Predicted RBP	13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	HIST1H2BA	Q96A08	127 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	YPEL4	Q96NS1	127 aa		13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	GSX1	Q9H4S2	264 aa	Predicted RBP	13.98	□□□□□ -0.17
LMNA-208	ENST00000448611	HECTD1	Q9ULT8	2610 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	IGLV11-55	A0A075B6I3	123 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	FANCD2OS	Q96PS1	177 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	UHRF2	Q96PU4	802 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	ZNF355P	Q9NSJ1	428 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	VPS13C	Q709C8	3753 aa		13.97	□□□□□ -0.17
LMNA-208	ENST00000448611	NDUFB4	O95168	129 aa		13.96	□□□□□ -0.17
LMNA-208	ENST00000448611	PLP1	P60201	277 aa		13.96	□□□□□ -0.17
LMNA-208	ENST00000448611	RPL23	P62829	140 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-208	ENST00000448611	RASL11B	Q9BPW5	248 aa		13.96	□□□□□ -0.17
LMNA-208	ENST00000448611	HSPB9	Q9BQS6	159 aa		13.96	□□□□□ -0.17
LMNA-208	ENST00000448611		B4DSR2	109 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611	MT-ND4L	P03901	98 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611	OR10J4	P0C629	311 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611	BRD3OS	Q6XYD6	125 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611	FAM24B	Q8N5W8	94 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611	OR5AU1	Q8NGC0	362 aa		13.96	□□□□□ -0.18
LMNA-208	ENST00000448611		A0A096LNT2	108 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	SCO2	A0A1W2PP80	73 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	CXorf65	A6NEN9	183 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	IGHV4-38-2	P0DP08	117 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	ADIRF	Q15847	76 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	LINC00305	Q7Z4B0	112 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	RBM14	Q96PK6	669 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	DERL1	Q9BUN8	251 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	C7orf69	Q9H7B7	122 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611	TMEM242	Q9NWH2	141 aa		13.95	□□□□□ -0.18
LMNA-208	ENST00000448611		A0A0U1RQK1	487 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	IGKV1-17	P01599	117 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	CRYBA1	P05813	215 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	ORM2	P19652	201 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	OR1B1	Q8NGR6	318 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	PIFO	Q8TCI5	191 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	C11orf52	Q96A22	123 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	MEGF9	Q9H1U4	602 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	HIF1AN	Q9NWT6	349 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	PSG1	P11464	419 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	TIGIT	Q495A1	244 aa		13.94	□□□□□ -0.18
LMNA-208	ENST00000448611	SVEP1	Q4LDE5	3571 aa		13.93	□□□□□ -0.18
LMNA-208	ENST00000448611	HYPM	O75409	117 aa		13.93	□□□□□ -0.18
LMNA-208	ENST00000448611	FOLR2	P14207	255 aa		13.93	□□□□□ -0.18
LMNA-208	ENST00000448611	RNF212	Q495C1	297 aa		13.93	□□□□□ -0.18
LMNA-208	ENST00000448611	SGMS2	Q8NHU3	365 aa		13.93	□□□□□ -0.18
LMNA-208	ENST00000448611	ABCA12	Q86UK0	2595 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	TRAV20	A0A0B4J274	112 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611		A0A1W2PRE2	83 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	PYY	P10082	97 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	UBE2L3	P68036	154 aa	Known RBP	13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	C5orf56	Q8N8D9	126 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	OR5T1	Q8NG75	326 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	ZNF48	Q96MX3	618 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	PAXX	Q9BUH6	204 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	GGTLC3	B5MD39	225 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	FXYD5	Q96DB9	178 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	CTDSP1	Q9GZU7	261 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	OR51M1	Q9H341	326 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	PRELID1	Q9Y255	219 aa		13.92	□□□□□ -0.18
LMNA-208	ENST00000448611	APC	P25054	2843 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms