RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SCAF4O95104 1147 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 OR2C1O95371 312 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 C1QBP02746 253 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 CTSGP08311 255 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 OR10J1P30954 320 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 SLURP1P55000 103 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 KRTAP21-3Q3LHN1 58 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 DPF1Q92782 380 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 GGACTQ9BVM4 153 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 MFFQ9GZY8 342 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 WFDC1Q9HC57 220 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 FBXL17Q9UF56 701 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 ANK2Q01484 3957 aa13.83□□□□□ -0.2
TRAPPC4-203ENST00000447216 IGKV1D-37A0A075B6S9 117 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 IGKV1OR2-108A0A075B7D4 117 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 LINC01619G3V211 115 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 NUPL2O15504 423 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 PFDN1O60925 122 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 IGKV1-17P01599 117 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 IGLC1P0CG04 106 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZNF616Q08AN1 781 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 ATP6V1FQ16864 119 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZNF414Q96IQ9 312 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 ATP6V0BQ99437 205 aa13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 GAR1Q9NY12 217 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZFP92A6NM28 416 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 HMSDA8MTL9 139 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 FNDC10F2Z333 226 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 GGCTO75223 188 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 TSPAN15O95858 294 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 CXCL2P19875 107 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 HOXD3P31249 432 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 RPEL1Q2QD12 228 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 VWC2Q2TAL6 325 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZFP69Q49AA0 526 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 FAM209BQ5JX69 171 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 SPSB3Q6PJ21 355 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 THAP8Q8NA92 274 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
TRAPPC4-203ENST00000447216 MYCNOSP40205 109 aa13.8□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZNF90Q03938 601 aa13.8□□□□□ -0.2
TRAPPC4-203ENST00000447216 FHL3Q13643 280 aa13.8□□□□□ -0.2
TRAPPC4-203ENST00000447216 ATP5SQ99766 215 aa13.8□□□□□ -0.2
TRAPPC4-203ENST00000447216 VWFP04275 2813 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 IGHV3OR16-8A0A075B7F1 116 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 TRAV30A0A087WSZ9 112 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 PF4P02776 101 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 OR2F1Q13607 317 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 OR4F17Q8NGA8 305 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 OR4F4Q96R69 305 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 TRGV9Q99603 122 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 WDR83OSQ9Y284 106 aa13.79□□□□□ -0.2
TRAPPC4-203ENST00000447216 ZP3P21754 424 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 FGF7P21781 194 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 NKX2-5P52952 324 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 SYNJ2BPP57105 145 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 BTNL8Q6UX41 500 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 KCNRGQ8N5I3 272 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 HYLS1Q96M11 299 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 MGST2Q99735 147 aa13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-203ENST00000447216 M0QZ24 198 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 SCGB2A1O75556 95 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 DFFBO76075 338 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 GATA2P23769 480 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 UNQ9165/PRO28630Q6UXU0 137 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 TMEM182Q6ZP80 229 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 CYP2G1PQ6ZSU1 146 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 SPATA3Q8NHX4 192 aa13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 PUS1Q9Y606 427 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC4-203ENST00000447216 AGPAT2O15120 278 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 YIF1AO95070 293 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 IFNA5P01569 189 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 PSG1P11464 419 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 YPEL3P61236 119 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 KLF5Q13887 457 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZNF345Q14585 488 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 GPHB5Q86YW7 130 aa13.76□□□□□ -0.21
TRAPPC4-203ENST00000447216 CMYA5Q8N3K9 4069 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 TRRAPQ9Y4A5 3859 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 A0A0D9SG52 128 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZNF320A2RRD8 509 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 BOLA2-SMG1P6H3BVE0 249 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 NDUFA4O00483 81 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZNF207O43670 478 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 TOMM40O96008 361 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 RD3LP0DJH9 198 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 FAM106AQ4KMX7 169 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms