RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 RNF2Q99496 336 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 TUBA4BQ9H853 241 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 A8MZ25 164 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 H3BP45 60 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 CCSO14618 274 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 MED6O75586 246 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-204ENST00000446876 OR10J1P30954 320 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 ASAH1Q13510 395 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 ETFRF1Q6IPR1 90 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 OR1S2Q8NGQ3 325 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 ST8SIA2Q92186 375 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 GINS3Q9BRX5 216 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
HDAC4-204ENST00000446876 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 TSPAN4O14817 238 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 IFNA21P01568 189 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC4-204ENST00000446876 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 U3KQK5 164 aa11.09□□□□□ -0.63
HDAC4-204ENST00000446876 TRAV30A0A087WSZ9 112 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 SSSCA1O60232 199 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 ID3Q02535 119 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-204ENST00000446876 SPANXN5Q5MJ07 72 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 LAMTOR1Q6IAA8 161 aa11.08□□□□□ -0.64
HDAC4-204ENST00000446876 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-204ENST00000446876 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-204ENST00000446876 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 TFPI2P48307 235 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 RAB11AP62491 216 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 GAMTQ14353 236 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 HAGHQ16775 308 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 TCF24Q7RTU0 167 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 ZBTB8BQ8NAP8 495 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 ENKURQ8TC29 256 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 SLC35E1Q96K37 410 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 CIB3Q96Q77 187 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-204ENST00000446876 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
HDAC4-204ENST00000446876 IGKV1D-37A0A075B6S9 117 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 PRSS46E5RG02 174 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 DFFBO76075 338 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 GPX4P36969 197 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-204ENST00000446876 ATP5IP56385 69 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-204ENST00000446876 YPEL3P61236 119 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-204ENST00000446876 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 GBGT1Q8N5D6 347 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 Q8WTZ3 238 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 METTL26Q96S19 204 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 TM2D3Q9BRN9 247 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 RETNQ9HD89 108 aa11.06□□□□□ -0.64
HDAC4-204ENST00000446876 ZFP92A6NM28 416 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 TOMM40O96008 361 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 IL4P05112 153 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 NPPCP23582 126 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 ZNF90Q03938 601 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-204ENST00000446876 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-204ENST00000446876 C12orf45Q8N5I9 185 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-204ENST00000446876 PSENENQ9NZ42 101 aa11.05□□□□□ -0.64
HDAC4-204ENST00000446876 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
HDAC4-204ENST00000446876 STRAPQ9Y3F4 350 aaKnown RBP11.05□□□□□ -0.64
HDAC4-204ENST00000446876 TENM3Q9P273 2699 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 OR4C46A6NHA9 309 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 CCNKO75909 580 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 PSG1P11464 419 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 CRYBB3P26998 211 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 BMI1P35226 326 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 PAX9P55771 341 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
HDAC4-204ENST00000446876 NRARPQ7Z6K4 114 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
HDAC4-204ENST00000446876 IGKV1OR2-108A0A075B7D4 117 aa11.03□□□□□ -0.64
HDAC4-204ENST00000446876 C5orf51A6NDU8 294 aa11.03□□□□□ -0.64
HDAC4-204ENST00000446876 MBPP02686 304 aaPredicted RBP11.03□□□□□ -0.64
HDAC4-204ENST00000446876 HNRNPCP07910 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC4-204ENST00000446876 P2RY1P47900 373 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms