RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SRP14P37108 136 aaKnown RBP7.32□□□□□ -1.24
HDAC6-209ENST00000440653 EFNA4P52798 201 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 DIAPH2-AS1Q14236 149 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 PSG5Q15238 335 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 TNXAQ16473 311 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 CST9LP1Q5W188 147 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 KCNIP4Q6PIL6 250 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 PPP1R27Q86WC6 154 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 STXBP6Q8NFX7 210 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 ABHD5Q8WTS1 349 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 Q8WTZ3 238 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 TRGV9Q99603 122 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 DPM3Q9P2X0 92 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 METTL1Q9UBP6 276 aaKnown RBP7.32□□□□□ -1.24
HDAC6-209ENST00000440653 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
HDAC6-209ENST00000440653 ABCA1O95477 2261 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 TNCP24821 2201 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-209ENST00000440653 MDFIC2A0A1B0GVS7 189 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 A0A1W2PRE2 83 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 CGB1A6NKQ9 187 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 UBE2CO00762 179 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 COX7A2P2O60397 106 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 NDUFA3O95167 84 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 IGHV2-5P01817 119 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 CRYGCP07315 174 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 C8orf88P0DMB2 117 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 LCN2P80188 198 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 ACY3Q96HD9 319 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 FAM210BQ96KR6 192 aa7.31□□□□□ -1.24
HDAC6-209ENST00000440653 SAV1Q9H4B6 383 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-209ENST00000440653 TBL2Q9Y4P3 447 aaKnown RBP7.31□□□□□ -1.24
HDAC6-209ENST00000440653 F11RQ9Y624 299 aaKnown RBP7.31□□□□□ -1.24
HDAC6-209ENST00000440653 TENM1Q9UKZ4 2725 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 IGKV1OR2-108A0A075B7D4 117 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 NBR2O15453 112 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 OR7C2O60412 319 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 SCGB2A1O75556 95 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 MOSP00540 346 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 DEFA4P12838 97 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
HDAC6-209ENST00000440653 ATP5G3P48201 142 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 FAM3BP58499 235 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-209ENST00000440653 UBE2G2P60604 165 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 GNB1P62873 340 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 UBE2L3P68036 154 aaKnown RBP7.3□□□□□ -1.24
HDAC6-209ENST00000440653 DEFA6Q01524 100 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 PLGLAQ15195 96 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 C10orf55Q5SWW7 151 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 PRSS57Q6UWY2 283 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 C16orf82Q7Z2V1 217 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 LRRC75A-AS1Q8N1F1 130 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 TMEM116Q8NCL8 245 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 NPBQ8NG41 125 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 SRSF12Q8WXF0 261 aaKnown RBP7.3□□□□□ -1.24
HDAC6-209ENST00000440653 PERPQ96FX8 193 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 UBTD1Q9HAC8 227 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
HDAC6-209ENST00000440653 YAE1D1Q9NRH1 226 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 TPSG1Q9NRR2 321 aa7.3□□□□□ -1.24
HDAC6-209ENST00000440653 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 PSMB11A5LHX3 300 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 AP4M1O00189 453 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 TIMM23O14925 209 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 TYMSP04818 313 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 GALR1P47211 349 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 PLP1P60201 277 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 RPL19P84098 196 aaKnown RBP7.29□□□□□ -1.24
HDAC6-209ENST00000440653 MMDQ15546 238 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 MRGPRG-AS1Q2M3A8 158 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 C10orf113Q5VZT2 155 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 MIR17HGQ75NE6 70 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 OR2T10Q8NGZ9 312 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 CFHR4Q92496 578 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 SLC25A33Q9BSK2 321 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 FNDC4Q9H6D8 234 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-209ENST00000440653 DNAJC4Q9NNZ3 241 aa7.29□□□□□ -1.24
HDAC6-209ENST00000440653 YTHDF2Q9Y5A9 579 aaKnown RBP7.29□□□□□ -1.24
HDAC6-209ENST00000440653 IGHV2-70DA0A0C4DH43 119 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 SCO2A0A1W2PP80 73 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 PPP5D1E7EU14 171 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 GGCTO75223 188 aaKnown RBP7.28□□□□□ -1.24
HDAC6-209ENST00000440653 FOXH1O75593 365 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 NDUFB4O95168 129 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 CXCL1P09341 107 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 KIAA0141Q14154 515 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-209ENST00000440653 SPATA31B1PQ5VZV4 182 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 ZNF343Q6P1L6 599 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms