RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
PTPRN-205ENST00000440552 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 RCVRNP35243 200 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 HOXA1P49639 335 aaPredicted RBP10.11□□□□□ -0.79
PTPRN-205ENST00000440552 AKR1C2P52895 323 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 YPEL3P61236 119 aaPredicted RBP10.11□□□□□ -0.79
PTPRN-205ENST00000440552 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 Q8WTZ3 238 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 NRN1Q9NPD7 142 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
PTPRN-205ENST00000440552 LRP1BQ9NZR2 4599 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 RPS19P39019 145 aaKnown RBP10.1□□□□□ -0.79
PTPRN-205ENST00000440552 OXA1LQ15070 435 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 AARDQ4LEZ3 155 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 TP53RKQ96S44 253 aa10.1□□□□□ -0.79
PTPRN-205ENST00000440552 GSTZ1O43708 216 aaPredicted RBP10.09□□□□□ -0.79
PTPRN-205ENST00000440552 SLC25A4P12235 298 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 HTR2BP41595 481 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 NKX2-1P43699 371 aaPredicted RBP10.09□□□□□ -0.79
PTPRN-205ENST00000440552 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 PRSS54Q6PEW0 395 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 LHFPL1Q86WI0 220 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 CLUHP3Q96NS8 147 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 Q9H521 79 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 RFNGQ9Y644 331 aa10.09□□□□□ -0.79
PTPRN-205ENST00000440552 C3orf85A0A1B0GTC6 90 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 SMIM31A0A1B0GVY4 71 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 BUB3O43684 328 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 APOA1P02647 267 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 PGAM2P15259 253 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 RND2P52198 227 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 PIGPP57054 158 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 FAM3BP58499 235 aaPredicted RBP10.08□□□□□ -0.8
PTPRN-205ENST00000440552 SPCS3P61009 180 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 DHODHQ02127 395 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 NEDD8Q15843 81 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
PTPRN-205ENST00000440552 SIGLEC15Q6ZMC9 328 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
PTPRN-205ENST00000440552 RRNAD1Q96FB5 475 aaKnown RBP10.08□□□□□ -0.8
PTPRN-205ENST00000440552 NIPSNAP3BQ9BS92 247 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 PLA2G2EQ9NZK7 142 aa10.08□□□□□ -0.8
PTPRN-205ENST00000440552 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 CDK2AP2O75956 126 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 PI3P19957 117 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 UCP1P25874 307 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 OR10J1P30954 320 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 TGFBR1P36897 503 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 EMP1P54849 157 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
PTPRN-205ENST00000440552 A0A0G2JRQ6 117 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 M0QYG6 137 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 IL4P05112 153 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 NUP62P37198 522 aaPredicted RBP10.06□□□□□ -0.8
PTPRN-205ENST00000440552 TRIM16LQ309B1 348 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 SNX29P2Q8IUI4 249 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 FAM219AQ8IW50 185 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 ARRDC1Q8N5I2 433 aa10.06□□□□□ -0.8
PTPRN-205ENST00000440552 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.06□□□□□ -0.8
PTPRN-205ENST00000440552 TOMM40O96008 361 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 FOXI2Q6ZQN5 318 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 SAV1Q9H4B6 383 aaPredicted RBP10.05□□□□□ -0.8
PTPRN-205ENST00000440552 HEYLQ9NQ87 328 aaPredicted RBP10.05□□□□□ -0.8
PTPRN-205ENST00000440552 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
PTPRN-205ENST00000440552 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 TBPP20226 339 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 SP6Q3SY56 376 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 RNASE10Q5GAN6 216 aaKnown RBP10.04□□□□□ -0.8
PTPRN-205ENST00000440552 NOXA1Q86UR1 476 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 ZNF709Q8N972 641 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 SLC24A4Q8NFF2 622 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
PTPRN-205ENST00000440552 ZFAND1Q8TCF1 268 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 COMMD3Q9UBI1 195 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 PFDN2Q9UHV9 154 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 GOLT1BQ9Y3E0 138 aa10.04□□□□□ -0.8
PTPRN-205ENST00000440552 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 C16orf90A8MZG2 172 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 NXPH3O95157 252 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 CDS2O95674 445 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 ID1P41134 155 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 PSMB3P49720 205 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 OR8G2PQ6IF36 304 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 TMEM88Q6PEY1 159 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 ABHD1Q96SE0 405 aa10.03□□□□□ -0.8
PTPRN-205ENST00000440552 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms