RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 LINC01560Q8TB33 94 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 NTF4P34130 210 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 FAM74A4Q5TZK3 123 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 CCL21O00585 134 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 C16orf92Q96LL3 132 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 A0A1B0GUT8 65 aa17■□□□□ 0.31
FMR1-208ENST00000440235 C9orf172C9J069 976 aa17■□□□□ 0.31
FMR1-208ENST00000440235 C1orf185Q5T7R7 199 aa17■□□□□ 0.31
FMR1-208ENST00000440235 A1L4Q6 167 aa17■□□□□ 0.31
FMR1-208ENST00000440235 M0R381 172 aa17■□□□□ 0.31
FMR1-208ENST00000440235 IGLV3-32A0A0A0MS00 114 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 hDV102S1A0JD36 115 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 GLRXP35754 106 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 PRELID3AQ96N28 172 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 PCDH15Q96QU1 1955 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 IGHV2-70P01814 119 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
FMR1-208ENST00000440235 SFXN3Q9BWM7 321 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 C1RLQ9NZP8 487 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 DLEU1O43261 78 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 ZNF585BQ52M93 769 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 GPR82Q96P67 336 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 MAP1LC3AQ9H492 121 aa16.99■□□□□ 0.31
FMR1-208ENST00000440235 PF4V1P10720 104 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 CX3CL1P78423 397 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 TMEM14EPQ6UXP3 125 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 GRAMD2BQ96HH9 432 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 Q9H3A6 140 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 SORL1Q92673 2214 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 LOC102723996A0A087X1L8 192 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 CDKN1AP38936 164 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 SMIM12Q96EX1 92 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 SNHG12Q9BXW3 62 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 ELOVL5Q9NYP7 299 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 CDC42EP3Q9UKI2 254 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 MGST2Q99735 147 aa16.98■□□□□ 0.31
FMR1-208ENST00000440235 TMEM265A0A087WTH1 108 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 IGKV1D-33P01593 117 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 IGKV1-33P01594 117 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 STAG3L2P0CL84 134 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 STAG3L3P0CL85 134 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 RSPO1Q2MKA7 263 aaPredicted RBP16.97■□□□□ 0.31
FMR1-208ENST00000440235 C1orf194Q5T5A4 169 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 RPP21Q9H633 154 aaKnown RBP16.97■□□□□ 0.31
FMR1-208ENST00000440235 IZUMO1RA6ND01 250 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 CRXO43186 299 aaPredicted RBP16.97■□□□□ 0.31
FMR1-208ENST00000440235 IL18BPO95998 194 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 C3orf79P0CE67 100 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 LYL1P12980 280 aa16.97■□□□□ 0.31
FMR1-208ENST00000440235 DENND4AQ7Z401 1863 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 TNFSF13O75888 250 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 PAX9P55771 341 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 Q0VFX4 171 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 FBLN7Q53RD9 439 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 AMMECR1LQ6DCA0 310 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 SH2D7A6NKC9 451 aaPredicted RBP16.96■□□□□ 0.31
FMR1-208ENST00000440235 C15orf61A6NNL5 157 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 LY6EQ16553 131 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 TMEM242Q9NWH2 141 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 SPRR3Q9UBC9 169 aa16.96■□□□□ 0.31
FMR1-208ENST00000440235 PEF1Q9UBV8 284 aaKnown RBP16.96■□□□□ 0.31
FMR1-208ENST00000440235 TRAV1-1A0A0B4J248 108 aa16.96■□□□□ 0.3
FMR1-208ENST00000440235 IQCF6A8MYZ5 107 aa16.96■□□□□ 0.3
FMR1-208ENST00000440235 MPV17L2Q567V2 206 aa16.96■□□□□ 0.3
FMR1-208ENST00000440235 RNF166Q96A37 237 aaPredicted RBP16.96■□□□□ 0.3
FMR1-208ENST00000440235 MRPL32Q9BYC8 188 aaKnown RBP16.96■□□□□ 0.3
FMR1-208ENST00000440235 MFAP4P55083 255 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 A8MWP6 167 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 IGHV2-5P01817 119 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 BMI1P35226 326 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 EXOC3-AS1Q8N2X6 119 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 ZNF418Q8TF45 676 aaPredicted RBP16.95■□□□□ 0.3
FMR1-208ENST00000440235 TLN2Q9Y4G6 2542 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 ZNF726P1Q15940 193 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 KLF17Q5JT82 389 aaPredicted RBP16.95■□□□□ 0.3
FMR1-208ENST00000440235 FOXC2Q99958 501 aa16.95■□□□□ 0.3
FMR1-208ENST00000440235 TRAV9-2A0A087WT02 112 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 APOMO95445 188 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 ZNF114Q8NC26 417 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 PHLDA3Q9Y5J5 127 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 PFN1P07737 140 aaKnown RBP16.94■□□□□ 0.3
FMR1-208ENST00000440235 NUDT10Q8NFP7 164 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 NUDT11Q96G61 164 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 A0A087X0K7 114 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 C15orf62A8K5M9 175 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 UPK2O00526 184 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 CACNG7P62955 275 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 ASCL5Q7RTU5 278 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 OSR1Q8TAX0 266 aaPredicted RBP16.94■□□□□ 0.3
FMR1-208ENST00000440235 TMEM186Q96B77 213 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 SPCS1Q9Y6A9 102 aa16.94■□□□□ 0.3
FMR1-208ENST00000440235 PLA2G2EQ9NZK7 142 aa16.93■□□□□ 0.3
FMR1-208ENST00000440235 FOXL1Q12952 345 aa16.93■□□□□ 0.3
FMR1-208ENST00000440235 TMEM42Q69YG0 159 aa16.93■□□□□ 0.3
FMR1-208ENST00000440235 HERVK_113P61574 105 aa16.93■□□□□ 0.3
FMR1-208ENST00000440235 RBPMS2Q6ZRY4 209 aaKnown RBP16.93■□□□□ 0.3
FMR1-208ENST00000440235 CIARTQ8N365 385 aaPredicted RBP16.93■□□□□ 0.3
FMR1-208ENST00000440235 TEX45Q8NA69 505 aa16.93■□□□□ 0.3
FMR1-208ENST00000440235 COQ2Q96H96 371 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms