RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SPAG16Q8N0X2 631 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 MS4A15Q8N5U1 240 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 RFKQ969G6 155 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 SDF2L1Q9HCN8 221 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 RPRMQ9NS64 109 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 OR51B2Q9Y5P1 312 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 BOLA2-SMG1P6H3BVE0 249 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 NQO2P16083 231 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 CRYBA4P53673 196 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
RTN4-211ENST00000438462 MRPL28Q13084 256 aaKnown RBP6.96□□□□□ -1.3
RTN4-211ENST00000438462 CDH26Q8IXH8 852 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 SPARTQ8N0X7 666 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 MRPL48Q96GC5 212 aaKnown RBP6.96□□□□□ -1.3
RTN4-211ENST00000438462 TMEM56Q96MV1 263 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 SLC25A39Q9BZJ4 359 aaPredicted RBP6.96□□□□□ -1.3
RTN4-211ENST00000438462 FGFR1OP2Q9NVK5 253 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
RTN4-211ENST00000438462 TAGLN3Q9UI15 199 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 PRO0255Q9UI72 69 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 NSG2Q9Y328 171 aa6.96□□□□□ -1.3
RTN4-211ENST00000438462 IGKV1D-13A0A0B4J2D9 117 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 K7EQD1 137 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 TNFSF12O43508 249 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 LALBAP00709 142 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 IGHV3-53P01767 116 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 FCGR3AP08637 254 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 IGKV1-13P0DP09 117 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 ST3GAL4Q11206 333 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 TIGITQ495A1 244 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 XAF1Q6GPH4 301 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 BLNKQ8WV28 456 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 DNAJC9Q8WXX5 260 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 ARHGAP5-AS1Q96IT6 56 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 C8orf49Q96NF6 230 aa6.95□□□□□ -1.3
RTN4-211ENST00000438462 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 A0A1W2PPK0 400 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 H7C1H1 209 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 CLN5O75503 358 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 CDK1P06493 297 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 UBBP0CG47 229 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 PECRQ9BY49 303 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
RTN4-211ENST00000438462 TRBV5-5A0A0J9YX44 114 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 FOXI3A8MTJ6 420 aaPredicted RBP6.93□□□□□ -1.3
RTN4-211ENST00000438462 ISLRO14498 428 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
RTN4-211ENST00000438462 SLC22A5O76082 557 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 HPRT1P00492 218 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 IGKV1-17P01599 117 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 HLA-DQB1P01920 261 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 NFYAP23511 347 aaPredicted RBP6.93□□□□□ -1.3
RTN4-211ENST00000438462 DAPP51397 102 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 SCAND1P57086 179 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 CCDC28AQ8IWP9 274 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 ZFP41Q8N8Y5 198 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 OR6F1Q8NGZ6 308 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 LPAR5Q9H1C0 372 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 FUT9Q9Y231 359 aa6.93□□□□□ -1.3
RTN4-211ENST00000438462 E5RGE8 158 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 H7BYZ3 331 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 CCSO14618 274 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 RBFOX2O43251 390 aaKnown RBP eCLIP6.92□□□□□ -1.32e-9■■■■□ 21
RTN4-211ENST00000438462 PITX3O75364 302 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 SCGB2A1O75556 95 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 DUSP14O95147 198 aaKnown RBP6.92□□□□□ -1.3
RTN4-211ENST00000438462 IL4P05112 153 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 RAP2AP10114 183 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 TMEM50BP56557 158 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 LGALS14Q8TCE9 139 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 PGLYRP3Q96LB9 341 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 HHLA3Q9XRX5 114 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 OR2W1Q9Y3N9 320 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
RTN4-211ENST00000438462 USH2AO75445 5202 aa6.92□□□□□ -1.3
RTN4-211ENST00000438462 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 SULT1C2O00338 296 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 ZNF182P17025 639 aaPredicted RBP6.91□□□□□ -1.3
RTN4-211ENST00000438462 GAMTQ14353 236 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 ZNF846Q147U1 533 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 Q499Y3 187 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 OR1B1Q8NGR6 318 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 PCNPQ8WW12 178 aaKnown RBP6.91□□□□□ -1.3
RTN4-211ENST00000438462 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
RTN4-211ENST00000438462 IGKV1D-8A0A087WSZ0 117 aa6.9□□□□□ -1.3
RTN4-211ENST00000438462 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
RTN4-211ENST00000438462 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
RTN4-211ENST00000438462 DAZ2Q13117 558 aaKnown RBP6.9□□□□□ -1.3
RTN4-211ENST00000438462 HES5Q5TA89 166 aa6.9□□□□□ -1.3
RTN4-211ENST00000438462 RPL22L1Q6P5R6 122 aaKnown RBP6.9□□□□□ -1.3
RTN4-211ENST00000438462 MYCBPQ99417 103 aaPredicted RBP6.9□□□□□ -1.3
RTN4-211ENST00000438462 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
RTN4-211ENST00000438462 TAAR5O14804 337 aa6.89□□□□□ -1.31
RTN4-211ENST00000438462 ERVK-16P61578 105 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms