RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 KLRD1Q13241 179 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 ATP6V1FQ16864 119 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 GAL3ST2Q9H3Q3 398 aa12.65□□□□□ -0.38
SCARF1-203ENST00000434376 YTHDF2Q9Y5A9 579 aaKnown RBP12.65□□□□□ -0.38
SCARF1-203ENST00000434376 PYYP10082 97 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 RAB31Q13636 194 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 LCN2P80188 198 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 EFNB3Q15768 340 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 KIR2DL5BA0A0G2JN68 375 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 KIR2DL5BA0A0G2JPC4 375 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 M0QZK8 103 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 VENTXO95231 258 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-203ENST00000434376 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 KIR2DL5AQ8N109 375 aa12.64□□□□□ -0.39
SCARF1-203ENST00000434376 SORL1Q92673 2214 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 PDE6DO43924 150 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 RPL8P62917 257 aaKnown RBP12.63□□□□□ -0.39
SCARF1-203ENST00000434376 KLF17Q5JT82 389 aaPredicted RBP12.63□□□□□ -0.39
SCARF1-203ENST00000434376 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 NABP2Q9BQ15 211 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 FBXL15Q9H469 300 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
SCARF1-203ENST00000434376 ST6GALNAC3Q8NDV1 305 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 ZNF430Q9H8G1 570 aaPredicted RBP12.63□□□□□ -0.39
SCARF1-203ENST00000434376 NGBQ9NPG2 151 aa12.63□□□□□ -0.39
SCARF1-203ENST00000434376 DSCAML1Q8TD84 2053 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 K7ENP7 123 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 ZNF253O75346 499 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 CNIH1O95406 144 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
SCARF1-203ENST00000434376 COL5A1-AS1Q5SY13 56 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 RUSC1-AS1Q66K80 236 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 ZNF439Q8NDP4 499 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 RNF114Q9Y508 228 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 AREGP15514 252 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
SCARF1-203ENST00000434376 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
SCARF1-203ENST00000434376 FBXL7Q9UJT9 491 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 INSIG2Q9Y5U4 225 aa12.62□□□□□ -0.39
SCARF1-203ENST00000434376 TYMSP04818 313 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 CGB3P0DN86 165 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 CGB7P0DN87 165 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 RANP62826 216 aaKnown RBP12.61□□□□□ -0.39
SCARF1-203ENST00000434376 TPTE2P1Q5T6R2 138 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 SLC25A48Q6ZT89 311 aaKnown RBP12.61□□□□□ -0.39
SCARF1-203ENST00000434376 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
SCARF1-203ENST00000434376 RNF24Q9Y225 148 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 TIMM9Q9Y5J7 89 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 LINC00312Q9Y6C7 94 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 IGHV3OR16-10A0A075B7F0 116 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 C20orf202A1L168 122 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 LCN12Q6JVE5 192 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 OR1B1Q8NGR6 318 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 IGSF10Q6WRI0 2623 aa12.61□□□□□ -0.39
SCARF1-203ENST00000434376 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 UPK2O00526 184 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 LINC00869P0C866 280 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-203ENST00000434376 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
SCARF1-203ENST00000434376 DDB2Q92466 427 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 GCHFRP30047 84 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 TP53TG3Q9ULZ0 132 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 LOC102724200A0A096LPH7 203 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-203ENST00000434376 WT1-ASQ06250 92 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 C1orf159Q96HA4 380 aa12.6□□□□□ -0.39
SCARF1-203ENST00000434376 H0YJW9 148 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 CFHR2P36980 270 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 PQLC2Q6ZP29 291 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 Q8N7P7 452 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 ABCA2Q9BZC7 2435 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 SRIP30626 198 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 STPG4Q8N801 248 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 RPEQ96AT9 228 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 KCNIP2Q9NS61 270 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 PRNDQ9UKY0 176 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 PPIAL4CA0A0B4J2A2 164 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 H0Y8G0 127 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 PPIAL4GP0DN37 164 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 GATA4P43694 442 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 RHOBP62745 196 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 UBE2L3P68036 154 aaKnown RBP12.59□□□□□ -0.39
SCARF1-203ENST00000434376 PAFAH1B2P68402 229 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 RELQ04864 619 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-203ENST00000434376 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 ST6GALNAC6Q969X2 333 aa12.59□□□□□ -0.39
SCARF1-203ENST00000434376 ZFHX3Q15911 3703 aa12.58□□□□□ -0.39
SCARF1-203ENST00000434376 GNG5P63218 68 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms