RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 CCDC160A6NGH7 325 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 CCL25O15444 150 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 TGOLN2O43493 480 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 OR2J2O76002 312 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 CALB1P05937 261 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 SMIM10L2AP0DMW4 78 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 SMIM10L2BP0DMW5 78 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 HIST1H1EP10412 219 aaKnown RBP0.1□□□□□ -2.39
LINC01239-201ENST00000433645 RPL5P46777 297 aaKnown RBP0.1□□□□□ -2.39
LINC01239-201ENST00000433645 SPCS3P61009 180 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 DEFB113Q30KQ7 82 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 LINC00575Q6W349 94 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 LINC00322Q6ZN03 302 aaPredicted RBP0.1□□□□□ -2.39
LINC01239-201ENST00000433645 PLPP5Q8NEB5 264 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 MRPS26Q9BYN8 205 aaKnown RBP0.1□□□□□ -2.39
LINC01239-201ENST00000433645 C14orf132Q9NPU4 83 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 PLAC8Q9NZF1 115 aa0.1□□□□□ -2.39
LINC01239-201ENST00000433645 TRBV6-4A0A1B0GX49 114 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 OR4E1P0C645 316 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 S100A4P26447 101 aaKnown RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 CIRBPQ14011 172 aaKnown RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 ESRGQ1W209 222 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 ACOT6Q3I5F7 207 aaPredicted RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 LINC01554Q52M75 96 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 FAM74A1Q5RGS3 127 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 SPOPLQ6IQ16 392 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 ANKRD29Q8N6D5 301 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 RNF122Q9H9V4 155 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 NIT2Q9NQR4 276 aa0.09□□□□□ -2.4
LINC01239-201ENST00000433645 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 V9GYY5 206 aaPredicted RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 WRNQ14191 1432 aaPredicted RBP eCLIP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 MED1Q15648 1581 aaPredicted RBP0.09□□□□□ -2.4
LINC01239-201ENST00000433645 PLXNA4Q9HCM2 1894 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 TNS3Q68CZ2 1445 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 CCL16O15467 120 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 RBP1P09455 135 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 SULT1A1P50225 295 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 TSNQ15631 228 aaKnown RBP0.08□□□□□ -2.4
LINC01239-201ENST00000433645 TMEM14CQ9P0S9 112 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 CYSLTR1Q9Y271 337 aa0.08□□□□□ -2.4
LINC01239-201ENST00000433645 KDM6AO15550 1401 aaPredicted RBP0.07□□□□□ -2.4
LINC01239-201ENST00000433645 MYH10P35580 1976 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 NUPR1O60356 82 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 TPM3P06753 285 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 RPS20P60866 119 aaKnown RBP0.07□□□□□ -2.4
LINC01239-201ENST00000433645 SPINK9Q5DT21 86 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 BRMS1LQ5PSV4 323 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 LINC00301Q8NCQ3 95 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 C2orf50Q96LR7 162 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 PPP1R2P1Q96PQ5 205 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 OR51V1Q9H2C8 321 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 CHCHD2Q9Y6H1 151 aaPredicted RBP0.07□□□□□ -2.4
LINC01239-201ENST00000433645 CITO14578 2027 aa0.07□□□□□ -2.4
LINC01239-201ENST00000433645 A0A087X0T9 212 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 TRAV26-2A0A0B4J265 109 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 PIRO00625 290 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 CETN3O15182 167 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 CRYZL1O95825 349 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 TTRP02766 147 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 SPRNQ5BIV9 151 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 CCDC122Q5T0U0 273 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 DCUN1D1Q96GG9 259 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 HEATR1Q9H583 2144 aaKnown RBP0.06□□□□□ -2.4
LINC01239-201ENST00000433645 GUCA1BQ9UMX6 200 aa0.06□□□□□ -2.4
LINC01239-201ENST00000433645 CHD3Q12873 2000 aaKnown RBP0.06□□□□□ -2.4
LINC01239-201ENST00000433645 HECW1Q76N89 1606 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 MYH7BA7E2Y1 1941 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 ARHGEF28Q8N1W1 1705 aaKnown RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 IGLV3-32A0A0A0MS00 114 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 TRAV3A0A0B4J244 114 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 IGHV1-58A0A0C4DH39 117 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 A0A0D9SG42 100 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR4C46A6NHA9 309 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 J3QRK9 145 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 M0R036 132 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 CHP2O43745 196 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 ZNF682O95780 498 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 DNAL4O96015 105 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 DHFRP00374 187 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 IFNA5P01569 189 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 IGLV3-1P01715 115 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 KRTAP2-3P0C7H8 128 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 CASP1P29466 404 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 ANP32AP39687 249 aaKnown RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 AP3S2P59780 193 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 TPM4P67936 248 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 CLECL1Q8IZS7 167 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR6V1Q8N148 313 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 C12orf45Q8N5I9 185 aaPredicted RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR11H6Q8NGC7 330 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR52R1Q8NGF1 315 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR8D4Q8NGM9 314 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 OR2T10Q8NGZ9 312 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 LLPHQ9BRT6 129 aaKnown RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 KRTAP2-4Q9BYR9 128 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 KRTAP2-1Q9BYU5 128 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 C6orf62Q9GZU0 229 aaPredicted RBP0.05□□□□□ -2.4
LINC01239-201ENST00000433645 HECW2Q9P2P5 1572 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms