RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OR1N2Q8NGR9 330 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 GNG7O60262 68 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 CXCL12P48061 93 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 CNEP1R1Q8N9A8 125 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 FBLL1A6NHQ2 334 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 LOXL3P58215 753 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 PAX2Q02962 417 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 DEFB108BQ8NET1 73 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 GTSF1Q8WW33 167 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 ZNF835Q9Y2P0 537 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 ABCA1O95477 2261 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 DYSFO75923 2080 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 TEX50A0A1B0GTY4 177 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 A8MWL6 223 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 MOSP00540 346 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
HMGCS1-202ENST00000433297 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 SRRM4A7MD48 611 aaKnown RBP9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 CIDEAO60543 219 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 HOXC12P31275 282 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 KIR2DS2P43631 304 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 PRNDQ9UKY0 176 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 IGHV1-2P23083 117 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 FXYD7P58549 80 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 PET117Q6UWS5 81 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 FAM90A1Q86YD7 464 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 C5orf17Q8NAS9 161 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 ASCL2Q99929 193 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 C19orf24Q9BVV8 132 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 A0A1B0GXF2 115 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 NHLH1Q02575 133 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 CD69Q07108 199 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 GUSBP1Q15486 140 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 PRSS3P2Q8NHM4 247 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 PPP1R35Q8TAP8 253 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 DDB2Q92466 427 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 H1FXQ92522 213 aaKnown RBP9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 ZFHX4Q86UP3 3567 aa9.37□□□□□ -0.91
HMGCS1-202ENST00000433297 NCR2O95944 276 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 FLYWCH2Q96CP2 140 aaKnown RBP9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 CEP192Q8TEP8 1941 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 IGHV3-21A0A0B4J1V1 117 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 MGST3O14880 152 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 COL8A1P27658 744 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 MEOX1P50221 254 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 GPR82Q96P67 336 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 JMJD8Q96S16 334 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 MRPL32Q9BYC8 188 aaKnown RBP9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 MS4A6AQ9H2W1 248 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 APELAP0DMC3 54 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 COX8AP10176 69 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 CADP27708 2225 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 OR2K2Q8NGT1 345 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 THYN1Q9P016 225 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
HMGCS1-202ENST00000433297 G3V4G9 280 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 UPK2O00526 184 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 RNASE2P10153 161 aaKnown RBP9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 REG1BP48304 166 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 PLP1P60201 277 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 PRSS57Q6UWY2 283 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 PATE2Q6UY27 113 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 ASPMQ8IZT6 3477 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 ZNF318Q5VUA4 2279 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 A0A0G2JLM5 398 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 ERHP84090 104 aaKnown RBP9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 ZNF257Q9Y2Q1 563 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 F11RQ9Y624 299 aaKnown RBP9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 A6NDN8 102 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 ACP1P24666 158 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms