RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 TBR1Q16650 682 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 ZNF833PQ6ZTB9 187 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 RP1L1Q8IWN7 2480 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 TNXAQ16473 311 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 GDF5OSQ5U4N7 250 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 ZNF474Q6S9Z5 364 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 STPG4Q8N801 248 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 OR1L4Q8NGR5 311 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 MBD3L2Q8NHZ7 208 aaPredicted RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 RBM14Q96PK6 669 aaKnown RBP12.16□□□□□ -0.46
LINC00839-202ENST00000429940 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
LINC00839-202ENST00000429940 ATRXP46100 2492 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 hADV38S2A0JD32 116 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 E7EUB6 86 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 HSBP1O75506 76 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 LCN12Q6JVE5 192 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
LINC00839-202ENST00000429940 YLPM1P49750 1951 aaKnown RBP12.15□□□□□ -0.47
LINC00839-202ENST00000429940 SIAH2O43255 324 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 CEACAM4O75871 244 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 BPIFB3P59826 476 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
LINC00839-202ENST00000429940 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 TNCP24821 2201 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 M0R2Z0 102 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 IGHV3-48P01763 117 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 MAJINQ3KP22 176 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 PATE2Q6UY27 113 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 NPIPB3Q92617 1050 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 CHRDL1Q9BU40 450 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 LINC00312Q9Y6C7 94 aa12.14□□□□□ -0.47
LINC00839-202ENST00000429940 A0A1W2PN81 502 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 H0YJW9 148 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 TNFSF4P23510 183 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 REG1BP48304 166 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 KLF5Q13887 457 aaPredicted RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 FXYD5Q96DB9 178 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 GAL3ST2Q9H3Q3 398 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 FNDC4Q9H6D8 234 aaPredicted RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 DCAF16Q9NXF7 216 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 HIGD1CA8MV81 97 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 NDUFB8O95169 186 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 CAMPP49913 170 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 GNG5P63218 68 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
LINC00839-202ENST00000429940 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 KALRNO60229 2985 aa12.13□□□□□ -0.47
LINC00839-202ENST00000429940 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 SFTPCP11686 197 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 UBE2G1P62253 170 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 RELQ04864 619 aaPredicted RBP12.12□□□□□ -0.47
LINC00839-202ENST00000429940 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 TMEM177Q53S58 311 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 RBMXL3Q8N7X1 1067 aaKnown RBP12.12□□□□□ -0.47
LINC00839-202ENST00000429940 OR5AN1Q8NGI8 311 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 IGKV1D-37A0A075B6S9 117 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 CORTO00230 105 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 TCF21O43680 179 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 PLAUP00749 431 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 TSPOP30536 169 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 Q56UQ5 140 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 C10orf55Q5SWW7 151 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 TEX36Q5VZQ5 186 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 EBLN2Q6P2I7 272 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
LINC00839-202ENST00000429940 NKX6-3A6NJ46 265 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 K7ENP7 123 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 OR2J3O76001 311 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 FSTL3O95633 263 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00839-202ENST00000429940 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 TMEM167AQ8TBQ9 72 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 C7orf69Q9H7B7 122 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 CCL3L1P16619 93 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 ZADH2Q8N4Q0 377 aa12.11□□□□□ -0.47
LINC00839-202ENST00000429940 OR8B3Q8NGG8 313 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms