RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 Q8N2B8 174 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 TMEM116Q8NCL8 245 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 OR4X1Q8NH49 305 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 FAM213BQ8TBF2 198 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 ZNF502Q8TBZ5 544 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 SLC25A22Q9H936 323 aa6.9□□□□□ -1.3
SMC6-204ENST00000428868 TCRBV4S1A1TA0A5B7 111 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 PSMB11A5LHX3 300 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 OR2T8A6NH00 312 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 ZFP92A6NM28 416 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 HMGB3O15347 200 aaKnown RBP6.89□□□□□ -1.31
SMC6-204ENST00000428868 MPDU1O75352 247 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 CLN5O75503 358 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 TRGV3P03979 118 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 RNASE1P07998 156 aaKnown RBP6.89□□□□□ -1.31
SMC6-204ENST00000428868 PF4V1P10720 104 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 HIST1H1BP16401 226 aaKnown RBP6.89□□□□□ -1.31
SMC6-204ENST00000428868 ADMP35318 185 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 TPPP2P59282 170 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 B2MP61769 119 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 PXDC1Q5TGL8 231 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 FAM122CQ6P4D5 195 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 SPSB3Q6PJ21 355 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 RPP25LQ8N5L8 163 aaKnown RBP6.89□□□□□ -1.31
SMC6-204ENST00000428868 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 RCC1LQ96I51 464 aaKnown RBP6.89□□□□□ -1.31
SMC6-204ENST00000428868 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 SLC39A9Q9NUM3 307 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 C21orf62Q9NYP8 219 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 DOK5Q9P104 306 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 ZNF580Q9UK33 172 aa6.89□□□□□ -1.31
SMC6-204ENST00000428868 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 C17orf112F2Z3M2 114 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 CLDN34H7C241 214 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 CRLF1O75462 422 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 TSPAN15O95858 294 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 IGHV3-11P01762 117 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 RPLP1P05386 114 aaKnown RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 GPR183P32249 361 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 RPL29P47914 159 aaKnown RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 FGF8P55075 233 aaPredicted RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 MFAP4P55083 255 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 CCL20P78556 96 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 ZNF616Q08AN1 781 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 KIAA0141Q14154 515 aaPredicted RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 Q56UQ5 140 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 MORN5Q5VZ52 161 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 EIF5AL1Q6IS14 154 aaKnown RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 CLEC19AQ6UXS0 136 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 PATE2Q6UY27 113 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 ZNF709Q8N972 641 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 NECAP1Q8NC96 275 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 ZNF418Q8TF45 676 aaPredicted RBP6.88□□□□□ -1.31
SMC6-204ENST00000428868 TRGV9Q99603 122 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 MDFIQ99750 246 aa6.88□□□□□ -1.31
SMC6-204ENST00000428868 IGHV3-35A0A0C4DH35 117 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 LINC00862A6NCI5 91 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 GNG7O60262 68 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 IGHG4P01861 327 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 CTSGP08311 255 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 PSG1P11464 419 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 PSMB8P28062 276 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 RAB14P61106 215 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 SERF2P84101 59 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 C18orf65Q6ZTR6 163 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 OR10G4Q8NGN3 311 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 OR10G9Q8NGN4 311 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 OR10G7Q8NGN6 311 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 VN1R17PQ8TDU5 208 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 TMEM37Q8WXS4 190 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 UHRF2Q96PU4 802 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 OR5B12Q96R08 314 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 GNB4Q9HAV0 340 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 THYN1Q9P016 225 aa6.87□□□□□ -1.31
SMC6-204ENST00000428868 IGHV3OR16-8A0A075B7F1 116 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 ANKRD34BA5PLL1 514 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 FAM223BA6NKX1 122 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 UMAD1C9J7I0 102 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 H3BUA1 57 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 TSPAN9O75954 239 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 BRI3O95415 125 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 M6PRP20645 277 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 FCGR2BP31994 310 aaPredicted RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 CDC34P49427 236 aaPredicted RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 RAB9AP51151 201 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 ATP5G2Q06055 141 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 RAB31Q13636 194 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 ACOT6Q3I5F7 207 aaPredicted RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 TCTEX1D4Q5JR98 221 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 MIR17HGQ75NE6 70 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 COMMD7Q86VX2 200 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 FAM223AQ8IWN6 122 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 243.2 ms