RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 SPRR3Q9UBC9 169 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 FAM19A2Q8N3H0 131 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 THBDP07204 575 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 CNTFRP26992 372 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 DMRTA1Q5VZB9 504 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
STRC-201ENST00000428650 CCL3L1P16619 93 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 C1orf194Q5T5A4 169 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 APC2O95996 2303 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 TSPAN13O95857 204 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
STRC-201ENST00000428650 SLC25A39Q9BZJ4 359 aaPredicted RBP11.9□□□□□ -0.5
STRC-201ENST00000428650 IGKCP01834 107 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 LINC01551Q86U37 167 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 ABHD17AQ96GS6 310 aa11.9□□□□□ -0.5
STRC-201ENST00000428650 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.51
STRC-201ENST00000428650 RSPO4Q2I0M5 234 aaPredicted RBP11.9□□□□□ -0.51
STRC-201ENST00000428650 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.51
STRC-201ENST00000428650 CD55P08174 381 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 IGKV1-27A0A075B6S5 117 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 FOXF2Q12947 444 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 COQ2Q96H96 371 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
STRC-201ENST00000428650 PF4P02776 101 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 GNG5P63218 68 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 GREB1Q4ZG55 1949 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 AMBPP02760 352 aa11.89□□□□□ -0.51
STRC-201ENST00000428650 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
STRC-201ENST00000428650 A0A1B0GWJ7 208 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 PLXNA3P51805 1871 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 A0A087WV48 116 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 ETV2O00321 342 aaPredicted RBP11.88□□□□□ -0.51
STRC-201ENST00000428650 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 M0R1W7 72 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
STRC-201ENST00000428650 ANK1P16157 1881 aa11.88□□□□□ -0.51
STRC-201ENST00000428650 IGKV1-5P01602 117 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 PYYP10082 97 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 RHOGP84095 191 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
STRC-201ENST00000428650 Q6P435 159 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 VSIRQ9H7M9 311 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 PINLYPA6NC86 204 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 IGHV3-23P01764 117 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 CXCL1P09341 107 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 COLCA1Q6ZS62 124 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
STRC-201ENST00000428650 MGST2Q99735 147 aa11.87□□□□□ -0.51
STRC-201ENST00000428650 PLNP26678 52 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 TMEM105Q8N8V8 129 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 LINC01587Q99440 93 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 NDUFA3O95167 84 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 RPRMLQ8N4K4 120 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 RPP25LQ8N5L8 163 aaKnown RBP11.86□□□□□ -0.51
STRC-201ENST00000428650 SLC25A15Q9Y619 301 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 RP1P56715 2156 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 IGHV2-26A0A0B4J1V2 119 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 H3BUT2 72 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 WNT2P09544 360 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 LAGE3Q14657 143 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 C9orf139Q6ZV77 190 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 SSBP4Q9BWG4 385 aaPredicted RBP11.86□□□□□ -0.51
STRC-201ENST00000428650 BEX4Q9NWD9 120 aaPredicted RBP11.86□□□□□ -0.51
STRC-201ENST00000428650 CEP290O15078 2479 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 E9PQ18 207 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 TCRAP04437 139 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 PAX8Q06710 450 aa11.86□□□□□ -0.51
STRC-201ENST00000428650 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.85□□□□□ -0.51
STRC-201ENST00000428650 TIMM23O14925 209 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
STRC-201ENST00000428650 SIGLEC15Q6ZMC9 328 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 IGHG3P01860 377 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 VDAC2P45880 294 aaPredicted RBP11.85□□□□□ -0.51
STRC-201ENST00000428650 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 GLRX5Q86SX6 157 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 DTX1Q86Y01 620 aa11.85□□□□□ -0.51
STRC-201ENST00000428650 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
STRC-201ENST00000428650 TRBV7-1A0A0A6YYK4 115 aa11.84□□□□□ -0.51
STRC-201ENST00000428650 FAM231BA6NCW3 169 aa11.84□□□□□ -0.51
STRC-201ENST00000428650 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms