RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 IGHV3-74A0A0B4J1X5 117 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 HAGHQ16775 308 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 LAMTOR1Q6IAA8 161 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 ETFRF1Q6IPR1 90 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 SLC16A13Q7RTY0 426 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 SPAG8Q99932 426 aaPredicted RBP12.47□□□□□ -0.41
VRK2-204ENST00000428021 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 MAGT1Q9H0U3 335 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 VSIRQ9H7M9 311 aa12.47□□□□□ -0.41
VRK2-204ENST00000428021 RBMY1BA6NDE4 496 aaKnown RBP12.46□□□□□ -0.41
VRK2-204ENST00000428021 RBMY1EA6NEQ0 496 aaKnown RBP12.46□□□□□ -0.41
VRK2-204ENST00000428021 SYNGR2O43760 224 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 MED6O75586 246 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 IFNA4P05014 189 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 RBMY1DP0C7P1 496 aaKnown RBP12.46□□□□□ -0.41
VRK2-204ENST00000428021 OR10J1P30954 320 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 ID3Q02535 119 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 OR1S2Q8NGQ3 325 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 MITD1Q8WV92 249 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 ST8SIA2Q92186 375 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 BATF3Q9NR55 127 aa12.46□□□□□ -0.41
VRK2-204ENST00000428021 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
VRK2-204ENST00000428021 GPX4P36969 197 aaPredicted RBP12.45□□□□□ -0.42
VRK2-204ENST00000428021 YPEL3P61236 119 aaPredicted RBP12.45□□□□□ -0.42
VRK2-204ENST00000428021 OR4D5Q8NGN0 318 aa12.45□□□□□ -0.42
VRK2-204ENST00000428021 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
VRK2-204ENST00000428021 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
VRK2-204ENST00000428021 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
VRK2-204ENST00000428021 WRBO00258 174 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 UPK1BO75841 260 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 IFNA21P01568 189 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 IFITM3Q01628 133 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 ASAH1Q13510 395 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 GAMTQ14353 236 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 ZNF846Q147U1 533 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 WWC2-AS2Q96NR7 200 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 CIB3Q96Q77 187 aaPredicted RBP12.44□□□□□ -0.42
VRK2-204ENST00000428021 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
VRK2-204ENST00000428021 WDR12Q9GZL7 423 aaKnown RBP12.44□□□□□ -0.42
VRK2-204ENST00000428021 IGHV3-66A0A0C4DH42 116 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 NPPCP23582 126 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 CRYBB3P26998 211 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 POLR2GP62487 172 aaKnown RBP eCLIP12.43□□□□□ -0.42
VRK2-204ENST00000428021 TCF24Q7RTU0 167 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 U3KQE9 123 aa12.43□□□□□ -0.42
VRK2-204ENST00000428021 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 FAM240BA0A1B0GVZ2 78 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 PRSS46E5RG02 174 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 H2AFB2P0C5Z0 115 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
VRK2-204ENST00000428021 RAB11AP62491 216 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 Q8WTZ3 238 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 METTL26Q96S19 204 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 UBQLN2Q9UHD9 624 aa12.42□□□□□ -0.42
VRK2-204ENST00000428021 OR4C46A6NHA9 309 aa12.41□□□□□ -0.42
VRK2-204ENST00000428021 DFFBO76075 338 aa12.41□□□□□ -0.42
VRK2-204ENST00000428021 TOMM40O96008 361 aa12.41□□□□□ -0.42
VRK2-204ENST00000428021 BMI1P35226 326 aa12.41□□□□□ -0.42
VRK2-204ENST00000428021 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
VRK2-204ENST00000428021 MZT2BQ6NZ67 158 aa12.41□□□□□ -0.42
VRK2-204ENST00000428021 ZNF431Q8TF32 576 aaPredicted RBP12.41□□□□□ -0.42
VRK2-204ENST00000428021 PAIP2BQ9ULR5 123 aaKnown RBP12.41□□□□□ -0.42
VRK2-204ENST00000428021 IGKV3-7A0A075B6H7 116 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 H3BP45 60 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 CD5P06127 495 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 RD3LP0DJH9 198 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 PSG1P11464 419 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 PAX9P55771 341 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
VRK2-204ENST00000428021 USF2Q15853 346 aaPredicted RBP12.4□□□□□ -0.42
VRK2-204ENST00000428021 SPANXN5Q5MJ07 72 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 GBGT1Q8N5D6 347 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 ZBTB8BQ8NAP8 495 aaPredicted RBP12.4□□□□□ -0.42
VRK2-204ENST00000428021 SLC35E1Q96K37 410 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
VRK2-204ENST00000428021 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.43
VRK2-204ENST00000428021 IGKV1OR2-108A0A075B7D4 117 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 A0A1W2PS18 150 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 CCSO14618 274 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 IL4P05112 153 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 TFPI2P48307 235 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 ZNF90Q03938 601 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 SMIM8Q96KF7 97 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
VRK2-204ENST00000428021 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
VRK2-204ENST00000428021 ZFP92A6NM28 416 aa12.38□□□□□ -0.43
VRK2-204ENST00000428021 PMS2P5A8MQ11 134 aa12.38□□□□□ -0.43
VRK2-204ENST00000428021 SSSCA1O60232 199 aa12.38□□□□□ -0.43
VRK2-204ENST00000428021 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
VRK2-204ENST00000428021 P2RY1P47900 373 aa12.38□□□□□ -0.43
VRK2-204ENST00000428021 C12orf45Q8N5I9 185 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms