RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TIGITQ495A1 244 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 GGNBP1Q5YKI7 109 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 LAMTOR1Q6IAA8 161 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 ZNF600Q6ZNG1 722 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 SLC16A13Q7RTY0 426 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 NOXA1Q86UR1 476 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 ACY3Q96HD9 319 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 GINS3Q9BRX5 216 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 PUS1Q9Y606 427 aaKnown RBP eCLIP9.64□□□□□ -0.87
VRK3-203ENST00000424804 DNAH6Q9C0G6 4158 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 TRAV14DV4A0A0A6YYC5 116 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 C15orf62A8K5M9 175 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 K7EMT4 169 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 WRBO00258 174 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 PLA2G10O15496 165 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 CLN5O75503 358 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 TFPI2P48307 235 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 DHRS2Q13268 280 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 ETFRF1Q6IPR1 90 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 TOMM20LQ6UXN7 152 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 LYG2Q86SG7 212 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 LRTM2Q8N967 370 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 TMEM116Q8NCL8 245 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 RNASEH2CQ8TDP1 164 aaKnown RBP9.63□□□□□ -0.87
VRK3-203ENST00000424804 S100ZQ8WXG8 99 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 C20orf85Q9H1P6 137 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
VRK3-203ENST00000424804 TRAV25A0A0B4J276 109 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 MED6O75586 246 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 JTBO76095 146 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 SCGB1D2O95969 90 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 IFNA21P01568 189 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 PVRIGQ6DKI7 326 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 OR4X1Q8NH49 305 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 TMEM170AQ8WVE7 144 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 GGTLC1Q9BX51 225 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 PTTG2Q9NZH5 202 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 SMPXQ9UHP9 88 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 U3KQ87 197 aa9.62□□□□□ -0.87
VRK3-203ENST00000424804 TRAV30A0A087WSZ9 112 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 TCRBP04435 133 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 SLC25A4P12235 298 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 OR10J1P30954 320 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 RAB11AP62491 216 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
VRK3-203ENST00000424804 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 PRSS54Q6PEW0 395 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 NPIPB3Q92617 1050 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 RNF2Q99496 336 aa9.61□□□□□ -0.87
VRK3-203ENST00000424804 LOC102724200A0A096LPH7 203 aaPredicted RBP9.6□□□□□ -0.87
VRK3-203ENST00000424804 FAM240BA0A1B0GVZ2 78 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 H3BP45 60 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 CHEK1O14757 476 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 SYNGR2O43760 224 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 PITX3O75364 302 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
VRK3-203ENST00000424804 SLC25A6P12236 298 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 BMI1P35226 326 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 OR1S2Q8NGQ3 325 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 Q8WTZ3 238 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 LINC00476Q8WZB0 136 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 ST8SIA2Q92186 375 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 SLC35E1Q96K37 410 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 OR10C1Q96KK4 312 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
VRK3-203ENST00000424804 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 NUDT15Q9NV35 164 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 GSKIPQ9P0R6 139 aa9.6□□□□□ -0.87
VRK3-203ENST00000424804 HERC2O95714 4834 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 FAM25EA8MYX2 175 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 CCSO14618 274 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 TSPAN4O14817 238 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 IGLC1P0CG04 106 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 NPPCP23582 126 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 ODF3L2Q3SX64 289 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 MZT2BQ6NZ67 158 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 LINC00299Q6ZSB3 139 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 TCF24Q7RTU0 167 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 NARS2Q96I59 477 aaKnown RBP9.59□□□□□ -0.87
VRK3-203ENST00000424804 CIB3Q96Q77 187 aaPredicted RBP9.59□□□□□ -0.87
VRK3-203ENST00000424804 METTL26Q96S19 204 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 SPAG8Q99932 426 aaPredicted RBP9.59□□□□□ -0.87
VRK3-203ENST00000424804 SEC22CQ9BRL7 303 aa9.59□□□□□ -0.87
VRK3-203ENST00000424804 ZFP92A6NM28 416 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 SSSCA1O60232 199 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 IGKV1-17P01599 117 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 IL4P05112 153 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms