RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
HDAC6-205ENST00000423941 TOMM20LQ6UXN7 152 aa13.94□□□□□ -0.18
HDAC6-205ENST00000423941 TMEM14EPQ6UXP3 125 aa13.94□□□□□ -0.18
HDAC6-205ENST00000423941 OR1S2Q8NGQ3 325 aa13.94□□□□□ -0.18
HDAC6-205ENST00000423941 PSENENQ9NZ42 101 aa13.94□□□□□ -0.18
HDAC6-205ENST00000423941 IZUMO1RA6ND01 250 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 ZNF785A8K8V0 405 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 K7EPK0 472 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 SSSCA1O60232 199 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 TSC22D2O75157 780 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 GP9P14770 177 aa13.93□□□□□ -0.18
HDAC6-205ENST00000423941 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
HDAC6-205ENST00000423941 CD300EQ496F6 205 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-205ENST00000423941 IGKV1D-37A0A075B6S9 117 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 FAM25EA8MYX2 175 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 OR10J1P30954 320 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 TIGITQ495A1 244 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 LCN12Q6JVE5 192 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 PRR25Q96S07 402 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 SMPXQ9UHP9 88 aa13.92□□□□□ -0.18
HDAC6-205ENST00000423941 PUS1Q9Y606 427 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC6-205ENST00000423941 H3BP45 60 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 SCAF4O95104 1147 aaKnown RBP13.91□□□□□ -0.18
HDAC6-205ENST00000423941 SCGB1D2O95969 90 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 Q8N1Y9 231 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 THAP8Q8NA92 274 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 C20orf24Q9BUV8 137 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 NMES1Q9C002 83 aa13.91□□□□□ -0.18
HDAC6-205ENST00000423941 IGKV1OR2-108A0A075B7D4 117 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 IGHV3OR16-8A0A075B7F1 116 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 TRAV25A0A0B4J276 109 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 IGHV7-4-1A0A0J9YVY3 117 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 SCGB2A1O75556 95 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 H2BFSP57053 126 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 MRAPQ8TCY5 172 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 DYNLRB2Q8TF09 96 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 ACY3Q96HD9 319 aa13.9□□□□□ -0.18
HDAC6-205ENST00000423941 TRAV14DV4A0A0A6YYC5 116 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 FNDC10F2Z333 226 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 GOSR2O14653 212 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 CHEK1O14757 476 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 YIF1AO95070 293 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 SIX6O95475 246 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 TOMM40O96008 361 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 RAB32Q13637 225 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 SLC35E1Q96K37 410 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 GINS3Q9BRX5 216 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 VSIRQ9H7M9 311 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 U3KQE9 123 aa13.89□□□□□ -0.19
HDAC6-205ENST00000423941 PRKDCP78527 4128 aaKnown RBP13.88□□□□□ -0.19
HDAC6-205ENST00000423941 ZNF207O43670 478 aaKnown RBP13.88□□□□□ -0.19
HDAC6-205ENST00000423941 CCNKO75909 580 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 CRYBB3P26998 211 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 CYCSP99999 105 aaKnown RBP13.88□□□□□ -0.19
HDAC6-205ENST00000423941 OXA1LQ15070 435 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 FAM90A2PQ658T7 463 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 BTNL8Q6UX41 500 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 Q8WTZ3 238 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 TRGV9Q99603 122 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 LSM5Q9Y4Y9 91 aaKnown RBP13.88□□□□□ -0.19
HDAC6-205ENST00000423941 ALG5Q9Y673 324 aa13.88□□□□□ -0.19
HDAC6-205ENST00000423941 METTL15P1P0C7V9 234 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 RD3LP0DJH9 198 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 PSG1P11464 419 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 DLK1P80370 383 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 ARL16Q0P5N6 197 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 RGS21Q2M5E4 152 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 ACOT7LQ6ZUV0 252 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 TMEM144Q7Z5S9 345 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-205ENST00000423941 RHPN1-AS1Q9BWJ2 59 aa13.87□□□□□ -0.19
HDAC6-205ENST00000423941 PAIP2BQ9ULR5 123 aaKnown RBP13.87□□□□□ -0.19
HDAC6-205ENST00000423941 TSPAN4O14817 238 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 DEDDO75618 318 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 APOHP02749 345 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-205ENST00000423941 NPPCP23582 126 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 ZNF90Q03938 601 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 OR10P1Q8NGE3 313 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 GGACTQ9BVM4 153 aa13.86□□□□□ -0.19
HDAC6-205ENST00000423941 ZFP92A6NM28 416 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 A8MZ25 164 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 L7N2F9 121 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 SSNA1O43805 119 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 PVALBP20472 110 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-205ENST00000423941 VAMP2P63027 116 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 OR8G2PQ6IF36 304 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 LILRB2Q8N423 598 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 RNF2Q99496 336 aa13.85□□□□□ -0.19
HDAC6-205ENST00000423941 LYRM2Q9NU23 88 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-205ENST00000423941 FAM24AA6NFZ4 105 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 H0YIZ8 118 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 USF2Q15853 346 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-205ENST00000423941 TMEM252Q8N6L7 170 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 OR51G1Q8NGK1 321 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 NPVFQ9HCQ7 196 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 C19orf73Q9NVV2 129 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 MGAT4CQ9UBM8 478 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 SELENOKQ9Y6D0 94 aa13.84□□□□□ -0.19
HDAC6-205ENST00000423941 SMAD5-AS1Q9Y6J3 95 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms