RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 LINC01619G3V211 115 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 CCL24O00175 119 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 SCAF4O95104 1147 aaKnown RBP12.08□□□□□ -0.48
DDX55-203ENST00000421670 TSPAN15O95858 294 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 CTSGP08311 255 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 OR10J1P30954 320 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 S100A11P31949 105 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 NUP62P37198 522 aaPredicted RBP12.08□□□□□ -0.48
DDX55-203ENST00000421670 SLURP1P55000 103 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 ZNF616Q08AN1 781 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 NUPL2O15504 423 aaKnown RBP12.07□□□□□ -0.48
DDX55-203ENST00000421670 IGLC1P0CG04 106 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
DDX55-203ENST00000421670 FHL3Q13643 280 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 TIGITQ495A1 244 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 DPF1Q92782 380 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 UQCC1Q9NVA1 299 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 FBXL17Q9UF56 701 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 DNHD1Q96M86 4753 aa12.07□□□□□ -0.48
DDX55-203ENST00000421670 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 ZFP92A6NM28 416 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 GGCTO75223 188 aaKnown RBP12.06□□□□□ -0.48
DDX55-203ENST00000421670 OR2C1O95371 312 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 IGKV1-17P01599 117 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 C1QBP02746 253 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 TMEM147Q9BVK8 224 aa12.06□□□□□ -0.48
DDX55-203ENST00000421670 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
DDX55-203ENST00000421670 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 PF4P02776 101 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 VWC2Q2TAL6 325 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 TMEM144Q7Z5S9 345 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 THAP8Q8NA92 274 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 ZNF414Q96IQ9 312 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 MFFQ9GZY8 342 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 NPVFQ9HCQ7 196 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 HMSDA8MTL9 139 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 M0QZ24 198 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 PFDN1O60925 122 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 ZNF90Q03938 601 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 ATP6V1FQ16864 119 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 ZFP69Q49AA0 526 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 ATP5SQ99766 215 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
DDX55-203ENST00000421670 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
DDX55-203ENST00000421670 TRAV30A0A087WSZ9 112 aa12.04□□□□□ -0.48
DDX55-203ENST00000421670 ZP3P21754 424 aa12.04□□□□□ -0.48
DDX55-203ENST00000421670 EIF2B2P49770 351 aaKnown RBP12.04□□□□□ -0.48
DDX55-203ENST00000421670 TEPPQ6URK8 271 aa12.04□□□□□ -0.48
DDX55-203ENST00000421670 SCGB2A1O75556 95 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 CXCL2P19875 107 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 MYCNOSP40205 109 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 SYNJ2BPP57105 145 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
DDX55-203ENST00000421670 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 DLX4Q92988 240 aaPredicted RBP12.03□□□□□ -0.48
DDX55-203ENST00000421670 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
DDX55-203ENST00000421670 MGST2Q99735 147 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 WDR83OSQ9Y284 106 aa12.03□□□□□ -0.48
DDX55-203ENST00000421670 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
DDX55-203ENST00000421670 YIF1AO95070 293 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 FGF7P21781 194 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 GATA2P23769 480 aaPredicted RBP12.02□□□□□ -0.49
DDX55-203ENST00000421670 OR2F1Q13607 317 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 ZNF345Q14585 488 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 BTNL8Q6UX41 500 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 ZNF600Q6ZNG1 722 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 TRGV9Q99603 122 aa12.02□□□□□ -0.49
DDX55-203ENST00000421670 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX55-203ENST00000421670 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 AGPAT2O15120 278 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 DFFBO76075 338 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 PSG1P11464 419 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
DDX55-203ENST00000421670 KLF5Q13887 457 aaPredicted RBP12.01□□□□□ -0.49
DDX55-203ENST00000421670 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
DDX55-203ENST00000421670 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 LINC00482Q8N8I6 264 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 NDUFA4O00483 81 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 TOMM40O96008 361 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 RD3LP0DJH9 198 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
DDX55-203ENST00000421670 TOMM20LQ6UXN7 152 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 GPHB5Q86YW7 130 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 C1QL4Q86Z23 238 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 TMEM190Q8WZ59 177 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 C20orf24Q9BUV8 137 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms