RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 OR1S2Q8NGQ3 325 aa14.07□□□□□ -0.16
PTCD3-204ENST00000418628 MRAPQ8TCY5 172 aa14.07□□□□□ -0.16
PTCD3-204ENST00000418628 C2orf50Q96LR7 162 aa14.07□□□□□ -0.16
PTCD3-204ENST00000418628 RAB40CQ96S21 281 aa14.07□□□□□ -0.16
PTCD3-204ENST00000418628 H3BP45 60 aa14.06□□□□□ -0.16
PTCD3-204ENST00000418628 IFNA4P05014 189 aa14.06□□□□□ -0.16
PTCD3-204ENST00000418628 YPEL3P61236 119 aaPredicted RBP14.06□□□□□ -0.16
PTCD3-204ENST00000418628 RAB11AP62491 216 aa14.06□□□□□ -0.16
PTCD3-204ENST00000418628 RPP30P78346 268 aaKnown RBP14.06□□□□□ -0.16
PTCD3-204ENST00000418628 LCN12Q6JVE5 192 aa14.06□□□□□ -0.16
PTCD3-204ENST00000418628 PUS1Q9Y606 427 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTCD3-204ENST00000418628 IGKV1D-37A0A075B6S9 117 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 IGHV3OR16-8A0A075B7F1 116 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 K7EPK0 472 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 TSC22D2O75157 780 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 OR10J1P30954 320 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 GAMTQ14353 236 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 TIGITQ495A1 244 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 SPANXN5Q5MJ07 72 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 GSG1LQ6UXU4 331 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 TMEM61Q8N0U2 210 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 DYNLRB2Q8TF09 96 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 NPIPB3Q92617 1050 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 GSKIPQ9P0R6 139 aa14.05□□□□□ -0.16
PTCD3-204ENST00000418628 STRAPQ9Y3F4 350 aaKnown RBP14.05□□□□□ -0.16
PTCD3-204ENST00000418628 IGHV7-4-1A0A0J9YVY3 117 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 C5orf51A6NDU8 294 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 ZNF785A8K8V0 405 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 SCGB2A1O75556 95 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 SCGB1D2O95969 90 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 BTNL8Q6UX41 500 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 Q8N1Y9 231 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 THAP8Q8NA92 274 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 C20orf24Q9BUV8 137 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 PSENENQ9NZ42 101 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 SMPXQ9UHP9 88 aa14.04□□□□□ -0.16
PTCD3-204ENST00000418628 IGKV1OR2-108A0A075B7D4 117 aa14.03□□□□□ -0.16
PTCD3-204ENST00000418628 FAM25EA8MYX2 175 aa14.03□□□□□ -0.16
PTCD3-204ENST00000418628 DCTN2Q13561 401 aaKnown RBP14.03□□□□□ -0.16
PTCD3-204ENST00000418628 ACY3Q96HD9 319 aa14.03□□□□□ -0.16
PTCD3-204ENST00000418628 SLC35E1Q96K37 410 aa14.03□□□□□ -0.16
PTCD3-204ENST00000418628 TRAV25A0A0B4J276 109 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 CHEK1O14757 476 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 ZNF207O43670 478 aaKnown RBP14.02□□□□□ -0.17
PTCD3-204ENST00000418628 CCNKO75909 580 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 TOMM40O96008 361 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 ACOT7LQ6ZUV0 252 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 WDR89Q96FK6 387 aaPredicted RBP14.02□□□□□ -0.17
PTCD3-204ENST00000418628 GINS3Q9BRX5 216 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 VSIRQ9H7M9 311 aa14.02□□□□□ -0.17
PTCD3-204ENST00000418628 GOSR2O14653 212 aa14.01□□□□□ -0.17
PTCD3-204ENST00000418628 YIF1AO95070 293 aa14.01□□□□□ -0.17
PTCD3-204ENST00000418628 H2BFSP57053 126 aa14.01□□□□□ -0.17
PTCD3-204ENST00000418628 RAB32Q13637 225 aa14.01□□□□□ -0.17
PTCD3-204ENST00000418628 NMES1Q9C002 83 aa14.01□□□□□ -0.17
PTCD3-204ENST00000418628 TRAV14DV4A0A0A6YYC5 116 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 FNDC10F2Z333 226 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 CRYBB3P26998 211 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 TRGV9Q99603 122 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 RHPN1-AS1Q9BWJ2 59 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 LSM5Q9Y4Y9 91 aaKnown RBP14□□□□□ -0.17
PTCD3-204ENST00000418628 U3KQE9 123 aa14□□□□□ -0.17
PTCD3-204ENST00000418628 A8MZ25 164 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 TSPAN4O14817 238 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 SIX6O95475 246 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 APOHP02749 345 aaPredicted RBP13.99□□□□□ -0.17
PTCD3-204ENST00000418628 METTL15P1P0C7V9 234 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 PSG1P11464 419 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 DLK1P80370 383 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 USF2Q15853 346 aaPredicted RBP13.99□□□□□ -0.17
PTCD3-204ENST00000418628 FAM90A2PQ658T7 463 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 RNF2Q99496 336 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 PAIP2BQ9ULR5 123 aaKnown RBP13.99□□□□□ -0.17
PTCD3-204ENST00000418628 ALG5Q9Y673 324 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 SELENOKQ9Y6D0 94 aa13.99□□□□□ -0.17
PTCD3-204ENST00000418628 ARL16Q0P5N6 197 aa13.98□□□□□ -0.17
PTCD3-204ENST00000418628 ST8SIA2Q92186 375 aa13.98□□□□□ -0.17
PTCD3-204ENST00000418628 LYRM2Q9NU23 88 aaPredicted RBP13.98□□□□□ -0.17
PTCD3-204ENST00000418628 SMAD5-AS1Q9Y6J3 95 aa13.98□□□□□ -0.17
PTCD3-204ENST00000418628 TENM3Q9P273 2699 aa13.98□□□□□ -0.17
PTCD3-204ENST00000418628 DEDDO75618 318 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 ZNF90Q03938 601 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 OXA1LQ15070 435 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 OR8G2PQ6IF36 304 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 TMEM144Q7Z5S9 345 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 LILRB2Q8N423 598 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 Q8WTZ3 238 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 METTL26Q96S19 204 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 SPAG8Q99932 426 aaPredicted RBP13.97□□□□□ -0.17
PTCD3-204ENST00000418628 B9D2Q9BPU9 175 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 AGRNO00468 2067 aa13.97□□□□□ -0.17
PTCD3-204ENST00000418628 IGHV3-49A0A0A0MS15 119 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 ZFP92A6NM28 416 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 SSNA1O43805 119 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 IL4P05112 153 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 CD7P09564 240 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 RD3LP0DJH9 198 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 S100A10P60903 97 aa13.96□□□□□ -0.17
PTCD3-204ENST00000418628 RGS21Q2M5E4 152 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms