RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RAB37Q96AX2 223 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 ADTRPQ96IZ2 230 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 PRSS22Q9GZN4 317 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 TRAV5A0A0B4J249 113 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 WNT9BO14905 357 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 FABP2P12104 132 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 MGST3O14880 152 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 SIVA1O15304 175 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 KIR2DS2P43631 304 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 SCGB2A2Q13296 93 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 RPL39P5Q59GN2 51 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 LINC00696Q6ZRV3 163 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 TDHQ8IZJ6 230 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 PRR7Q8TB68 274 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 A1L4Q6 167 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 NCR2O95944 276 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 FTH1P19P0C7X4 201 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 LTC4SQ16873 150 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 OR10W1Q8NGF6 305 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 OR4X2Q8NGF9 303 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 DDB2Q92466 427 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 PGLYRP4Q96LB8 373 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 TFF1P04155 84 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 RBPMS2Q6ZRY4 209 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 FAM90A1Q86YD7 464 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 OR9G1Q8NH87 305 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 GFRA4Q9GZZ7 299 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF576Q9H609 170 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 KLF13Q9Y2Y9 288 aaPredicted RBP6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 CHEK1O14757 476 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 PYYP10082 97 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF137PP52743 207 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
HMGXB4-202ENST00000418170 SRRM4A7MD48 611 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 RAB9AP51151 201 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 LINC00322Q6ZN03 302 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 NANOS1Q8WY41 292 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 ABHD17AQ96GS6 310 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 DCTN5Q9BTE1 182 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 GNG12Q9UBI6 72 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 KLF12Q9Y4X4 402 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 TIMM8BQ9Y5J9 83 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 BOD1L1Q8NFC6 3051 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 PCSK5Q92824 1860 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 IGHV5-10-1A0A0J9YXX1 117 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 MYCNOSP40205 109 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 CSN1S1P47710 185 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 HOXA4Q00056 320 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 TIMM23BQ5SRD1 257 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 ACP7Q6ZNF0 438 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 FOXI2Q6ZQN5 318 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 GPR82Q96P67 336 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 PAXXQ9BUH6 204 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 HINT2Q9BX68 163 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 JPT1Q9UK76 154 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 BDP1A6H8Y1 2624 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 C19orf71A6NCJ1 209 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 M0R296 226 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 MYOD1P15172 320 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 GNG5P63218 68 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 ALKBH6Q3KRA9 238 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF826PQ6ZT77 177 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 PIP4P2Q8N4L2 257 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 OR2Z1Q8NG97 314 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF714Q96N38 554 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 COL25A1Q9BXS0 654 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 IFI27L2Q9H2X8 130 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 METRNQ9UJH8 293 aa6.5□□□□□ -1.37
HMGXB4-202ENST00000418170 P01737 135 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 CSN3P07498 182 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 TNCP24821 2201 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 A0A1W2PQM1 296 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 KLF7O75840 302 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 C11orf53Q8IXP5 236 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 FXYD5Q96DB9 178 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 PLSCR4Q9NRQ2 329 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 EPDR1Q9UM22 224 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 INSIG2Q9Y5U4 225 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 HAX1O00165 279 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 IGHV3-7P01780 117 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF134P52741 427 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 ATP5IP56385 69 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 CKS1BP61024 79 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 PRCDQ00LT1 54 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 SRYQ05066 204 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 TCTEX1D4Q5JR98 221 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 CCDC144NLQ6NUI1 221 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms