RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MRAPQ8TCY5 172 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 GINS3Q9BRX5 216 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 WI2-2373I1.2A0A1W2PRP0 233 aa17.5■□□□□ 0.39
SMARCB1-205ENST00000417137 H3BP45 60 aa17.5■□□□□ 0.39
SMARCB1-205ENST00000417137 PUS1Q9Y606 427 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMARCB1-205ENST00000417137 GOSR2O14653 212 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 TSC22D2O75157 780 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 IGKV1-17P01599 117 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 IGLC1P0CG04 106 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 GP9P14770 177 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 PVALBP20472 110 aaPredicted RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 YPEL3P61236 119 aaPredicted RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 CYCSP99999 105 aaKnown RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 GAMTQ14353 236 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 TIGITQ495A1 244 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 CD300EQ496F6 205 aaPredicted RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 TOMM20LQ6UXN7 152 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 Q8WTZ3 238 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 PRR25Q96S07 402 aa17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 RCL1Q9Y2P8 373 aaKnown RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 LSM5Q9Y4Y9 91 aaKnown RBP17.49■□□□□ 0.39
SMARCB1-205ENST00000417137 IGHV3OR16-8A0A075B7F1 116 aa17.48■□□□□ 0.39
SMARCB1-205ENST00000417137 TRAV14DV4A0A0A6YYC5 116 aa17.48■□□□□ 0.39
SMARCB1-205ENST00000417137 PAX9P55771 341 aa17.48■□□□□ 0.39
SMARCB1-205ENST00000417137 RGS21Q2M5E4 152 aa17.48■□□□□ 0.39
SMARCB1-205ENST00000417137 DEFB121Q5J5C9 76 aa17.48■□□□□ 0.39
SMARCB1-205ENST00000417137 C7orf66A4D0T2 115 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 K7EIL1 84 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 K7EPK0 472 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 ZNF207O43670 478 aaKnown RBP17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 EDN2P20800 178 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 BMI1P35226 326 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 IL15RAQ13261 267 aa17.47■□□□□ 0.39
SMARCB1-205ENST00000417137 ZFP92A6NM28 416 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 FABP1P07148 127 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 S100A10P60903 97 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 TMEM14EPQ6UXP3 125 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 OR10P1Q8NGE3 313 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 ZNF414Q96IQ9 312 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 NMES1Q9C002 83 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 MLXQ9UH92 298 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 SMPXQ9UHP9 88 aa17.46■□□□□ 0.39
SMARCB1-205ENST00000417137 TRAV25A0A0B4J276 109 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 IGHV7-4-1A0A0J9YVY3 117 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 PRSS46E5RG02 174 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 SIX6O95475 246 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 RLN2P04090 185 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 RD3LP0DJH9 198 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 LAMTOR1Q6IAA8 161 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 OR8G2PQ6IF36 304 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 BTNL8Q6UX41 500 aa17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 RBPMS2Q6ZRY4 209 aaKnown RBP17.45■□□□□ 0.38
SMARCB1-205ENST00000417137 NPPCP23582 126 aa17.44■□□□□ 0.38
SMARCB1-205ENST00000417137 BCAP31P51572 246 aa17.44■□□□□ 0.38
SMARCB1-205ENST00000417137 RAB32Q13637 225 aa17.44■□□□□ 0.38
SMARCB1-205ENST00000417137 METTL26Q96S19 204 aa17.44■□□□□ 0.38
SMARCB1-205ENST00000417137 ZFAND3Q9H8U3 227 aa17.44■□□□□ 0.38
SMARCB1-205ENST00000417137 IZUMO1RA6ND01 250 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 SCAF4O95104 1147 aaKnown RBP17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 TOMM40O96008 361 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 METTL15P1P0C7V9 234 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 GUCA2BQ16661 112 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 GTSCR1Q86UQ5 136 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 NARS2Q96I59 477 aaKnown RBP17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 RHPN1-AS1Q9BWJ2 59 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 ALG5Q9Y673 324 aa17.43■□□□□ 0.38
SMARCB1-205ENST00000417137 PMS2P5A8MQ11 134 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 CHEK1O14757 476 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 CD5P06127 495 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 CAV2P51636 162 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 AKR1C1Q04828 323 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 ACOT7LQ6ZUV0 252 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 TRGV9Q99603 122 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 TMEM231Q9H6L2 316 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 MGAT4CQ9UBM8 478 aa17.42■□□□□ 0.38
SMARCB1-205ENST00000417137 A0A1W2PS18 150 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 ZNF785A8K8V0 405 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 DLK1P80370 383 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 TMEM144Q7Z5S9 345 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 TMEM61Q8N0U2 210 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 THAP8Q8NA92 274 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 OR51G1Q8NGK1 321 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 LSM4Q9Y4Z0 139 aaKnown RBP17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 SMAD5-AS1Q9Y6J3 95 aa17.41■□□□□ 0.38
SMARCB1-205ENST00000417137 SMCO3A2RU48 225 aa17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 FNDC10F2Z333 226 aa17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 PSG1P11464 419 aa17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 H2BFSP57053 126 aa17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 WDR89Q96FK6 387 aaPredicted RBP17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 GGACTQ9BVM4 153 aa17.4■□□□□ 0.38
SMARCB1-205ENST00000417137 IGKV1D-37A0A075B6S9 117 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 IGHV3-49A0A0A0MS15 119 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 DEDDO75618 318 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 CFDP00746 253 aaPredicted RBP17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 IL4P05112 153 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 CRYBB3P26998 211 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 C11orf1Q9H5F2 150 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 NPVFQ9HCQ7 196 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 LYRM2Q9NU23 88 aaPredicted RBP17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 PFDN2Q9UHV9 154 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms