RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 C11orf68Q9H3H3 251 aaKnown RBP8.8□□□□□ -1
COL12A1-203ENST00000416123 SHANK1Q9Y566 2161 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 SAP30O75446 220 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 DUTP33316 252 aaKnown RBP8.8□□□□□ -1
COL12A1-203ENST00000416123 COX6CP09669 75 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 CD177Q8N6Q3 437 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 MDS2Q8NDY4 140 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 RNF125Q96EQ8 232 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 SCGB3A1Q96QR1 104 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
COL12A1-203ENST00000416123 COL8A2P25067 703 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 NDPQ00604 133 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 PAX8Q06710 450 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 JMJD8Q96S16 334 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 COL25A1Q9BXS0 654 aaPredicted RBP8.79□□□□□ -1
COL12A1-203ENST00000416123 IL36BQ9NZH7 164 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 ARHGAP21Q5T5U3 1957 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 RPL35AP18077 110 aaKnown RBP8.79□□□□□ -1
COL12A1-203ENST00000416123 CCL1P22362 96 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 ST6GALNAC6Q969X2 333 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 LYPD2Q6UXB3 125 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 GAS1P54826 345 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 TMEM136Q6ZRR5 245 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 IGHV3-73A0A0B4J1V6 119 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
COL12A1-203ENST00000416123 TCF23Q7RTU1 214 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 OR5AN1Q8NGI8 311 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 CACNG8Q8WXS5 425 aa8.79□□□□□ -1
COL12A1-203ENST00000416123 SSBP4Q9BWG4 385 aaPredicted RBP8.79□□□□□ -1
COL12A1-203ENST00000416123 A0A1B0GUT8 65 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 MALP21145 153 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 EFNB1P98172 346 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 RNF126Q9BV68 326 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 NBASA2RRP1 2371 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 PSPNO60542 156 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 MYOD1P15172 320 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 CRYGSP22914 178 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 PSMG4Q5JS54 123 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 SIGLEC15Q6ZMC9 328 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 EFNA4P52798 201 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 RIPPLY3P57055 190 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 RNF144BQ7Z419 303 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 H3BUX3 64 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 OR10J3Q5JRS4 329 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 C17orf82Q86X59 251 aaPredicted RBP8.78□□□□□ -1
COL12A1-203ENST00000416123 ABCA4P78363 2273 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 H7C1H1 209 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 C15orf32Q32M92 178 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 PRR31Q5SQ13 230 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 ZNF329Q86UD4 541 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 FOXC2Q99958 501 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 ZNF581Q9P0T4 197 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 NAT1P18440 290 aa8.78□□□□□ -1
COL12A1-203ENST00000416123 IGKV2-40A0A087WW87 121 aaPredicted RBP8.77□□□□□ -1
COL12A1-203ENST00000416123 IGKV2D-40P01614 121 aaPredicted RBP8.77□□□□□ -1
COL12A1-203ENST00000416123 PMCHL1Q16048 86 aa8.77□□□□□ -1
COL12A1-203ENST00000416123 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1
COL12A1-203ENST00000416123 JKAMPQ9P055 326 aa8.77□□□□□ -1
COL12A1-203ENST00000416123 TRBV9A0A0B4J1U6 114 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 ZNF415Q09FC8 603 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 FAM166AQ6J272 317 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 BPESC1Q9GZL8 116 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 TRAV41A0A0B4J266 112 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 IGHV1-3A0A0C4DH29 117 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 KLF17Q5JT82 389 aaPredicted RBP8.77□□□□□ -1.01
COL12A1-203ENST00000416123 GZMBP10144 247 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 FABP2P12104 132 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 BTCP35070 178 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 ZNF506Q5JVG8 444 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 C14orf144Q96I85 54 aa8.77□□□□□ -1.01
COL12A1-203ENST00000416123 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1.01
COL12A1-203ENST00000416123 TRAV3A0A0B4J244 114 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 C1QTNF9P0C862 333 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 LEPP41159 167 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
COL12A1-203ENST00000416123 TMEM144Q7Z5S9 345 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 BMPERQ8N8U9 685 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 ST6GALNAC3Q8NDV1 305 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 PGPEP1LA6NFU8 196 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 PAX1P15863 534 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 MBNL3Q9NUK0 354 aaKnown RBP8.76□□□□□ -1.01
COL12A1-203ENST00000416123 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 RPRMLQ8N4K4 120 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 PNRC2Q9NPJ4 139 aaKnown RBP8.76□□□□□ -1.01
COL12A1-203ENST00000416123 ZNRD1Q9P1U0 126 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
COL12A1-203ENST00000416123 RNF223E7ERA6 249 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 CACNG7P62955 275 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 LRTM2Q8N967 370 aa8.76□□□□□ -1.01
COL12A1-203ENST00000416123 RNF222A6NCQ9 220 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms