RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 AARDQ4LEZ3 155 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 OR1S2Q8NGQ3 325 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 Q8WTZ3 238 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 TP53RKQ96S44 253 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 ENY2Q9NPA8 101 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 NRN1Q9NPD7 142 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
DDX56-202ENST00000415758 NACAE9PAV3 2078 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 RPS10-NUDT3A0A1W2PQS6 291 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 RCVRNP35243 200 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 TGFBR1P36897 503 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 NKX2-1P43699 371 aaPredicted RBP10.96□□□□□ -0.65
DDX56-202ENST00000415758 HOXA1P49639 335 aaPredicted RBP10.96□□□□□ -0.65
DDX56-202ENST00000415758 AKR1C2P52895 323 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 PRSS54Q6PEW0 395 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 UBE2DNLQ8IWF7 75 aa10.96□□□□□ -0.65
DDX56-202ENST00000415758 HSPG2P98160 4391 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 C3orf85A0A1B0GTC6 90 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 BUB3O43684 328 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 SLC25A4P12235 298 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 HTR2BP41595 481 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 PIGPP57054 158 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 DHODHQ02127 395 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 OXA1LQ15070 435 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 USF2Q15853 346 aaPredicted RBP10.95□□□□□ -0.66
DDX56-202ENST00000415758 C1orf134Q5TEV5 83 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
DDX56-202ENST00000415758 A0A0G2JRQ6 117 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 SMIM31A0A1B0GVY4 71 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 APOA1P02647 267 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 PGAM2P15259 253 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 PI3P19957 117 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 OR10J1P30954 320 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 SPCS3P61009 180 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 NEDD8Q15843 81 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 SIGLEC15Q6ZMC9 328 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 OR52E5Q8NH55 327 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 RNASEH2CQ8TDP1 164 aaKnown RBP10.94□□□□□ -0.66
DDX56-202ENST00000415758 RRNAD1Q96FB5 475 aaKnown RBP10.94□□□□□ -0.66
DDX56-202ENST00000415758 NIPSNAP3BQ9BS92 247 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 Q9H521 79 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 RFNGQ9Y644 331 aa10.94□□□□□ -0.66
DDX56-202ENST00000415758 CDK2AP2O75956 126 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 UCP1P25874 307 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 RND2P52198 227 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 EMP1P54849 157 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 FAM222AQ5U5X8 452 aa10.93□□□□□ -0.66
DDX56-202ENST00000415758 M0QYG6 137 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 GSTZ1O43708 216 aaPredicted RBP10.92□□□□□ -0.66
DDX56-202ENST00000415758 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 IL4P05112 153 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 FAM3BP58499 235 aaPredicted RBP10.92□□□□□ -0.66
DDX56-202ENST00000415758 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 GDF5OSQ5U4N7 250 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 SNX29P2Q8IUI4 249 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 FAM219AQ8IW50 185 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
DDX56-202ENST00000415758 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.92□□□□□ -0.66
DDX56-202ENST00000415758 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
DDX56-202ENST00000415758 TOMM40O96008 361 aa10.91□□□□□ -0.66
DDX56-202ENST00000415758 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
DDX56-202ENST00000415758 SP6Q3SY56 376 aa10.91□□□□□ -0.66
DDX56-202ENST00000415758 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
DDX56-202ENST00000415758 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
DDX56-202ENST00000415758 NXPH3O95157 252 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 CDS2O95674 445 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 RNASE10Q5GAN6 216 aaKnown RBP10.9□□□□□ -0.66
DDX56-202ENST00000415758 ETFRF1Q6IPR1 90 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 CCDC71LQ8N9Z2 235 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 ZFAND1Q8TCF1 268 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 NPIPB3Q92617 1050 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 HEYLQ9NQ87 328 aaPredicted RBP10.9□□□□□ -0.66
DDX56-202ENST00000415758 COPZ2Q9P299 210 aa10.9□□□□□ -0.66
DDX56-202ENST00000415758 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 PSG1P11464 419 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 TBPP20226 339 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 LSM3P62310 102 aaKnown RBP10.89□□□□□ -0.67
DDX56-202ENST00000415758 SPATA31B1PQ5VZV4 182 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 SLC24A4Q8NFF2 622 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 TERB2Q8NHR7 220 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 RNASE11Q8TAA1 199 aaKnown RBP10.89□□□□□ -0.67
DDX56-202ENST00000415758 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 KLK11Q9UBX7 282 aa10.89□□□□□ -0.67
DDX56-202ENST00000415758 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 CD3DP04234 171 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 ELK1P19419 428 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 NUP62P37198 522 aaPredicted RBP10.88□□□□□ -0.67
DDX56-202ENST00000415758 FXYD7P58549 80 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 DEFB1P60022 68 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 TNP2Q05952 138 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 ZNF79Q15937 498 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms